| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4560 |
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| Symbol | |
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| ID | 4313452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1512186 |
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| End bp | 1513127 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152399 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_776444 |
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| Protein GI | 115359306 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.724855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.355446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC AATCGAAAAA TCCGCAACCC GGGCATGCCG CCCGCGCATA CCCGCTCGCG
GATCTGACGC GCGCGCTGCC GCCGCTGACG GCGTTCCAGG CGTTTGTCGC CGCCGCCGAA
CTGGGCAGCT TCAACCGGGC CGCCGAGCAT CTGTGCCGGA CCCAGGGCGC GGTGAGCCGT
CAGGTGCAGC AACTGGAAGC GCACTACCGG TGTGCGTTGT TCGTCCGTCA TCCGTCGGGA
TTGACGTTGA CCACGGAAGG CGACGCGTTG CTGACGGTGG CCGTCGACGT CCTCGCGCAA
CTGGCGCGAC ACGCTCACGC CCATGCGCAT GCCGCGTCGA CGCTGACGTT GCGGCTGCCT
TCCACGTTTG CGATCCGCTG GCTGCTGCCG CGGCTGTCCG CGCTCAATCA CGCATTGCCG
CGGACCGAAT TGCGCATCCA CACGTCGGCG GACGACACGC CGGATTTCAC CGACGCCGAT
TTCGATGCGA TCGTCGTGCG TGGCACCGGC AATTGGGCGG GCATGGTGGC GGTCCCGCTA
TTCGACGAAT ACCTGACGCC GATGTGTACG TGTGAGGTGG GCGCGTCGTT GCAGTCGGTC
ACCGATCTCG CGCGGGTGAC GCTGCTGCAT CCCGCGCGCA ATCGCGATGA ATGGCGATGC
TGGCTCGACG CCGTGGGCGC CACGCAGATC GACCCGCGCA CCGGGCTCGT ATTCGATACG
CTCGAACTGA CACTGACGGC CGCGGCCCAG GCGCACGGCG TCGCGATCGG CGATCCGCGC
ATGGCGGCGG ATCGGCTGGC AGCCGGAACG CTGGTCGCGC CGTTTTCGGA GGTGGTGCGC
AACGGTCTGG GCTACTACCT TGTCTACCCG GTGCAACGCG CCGCGCAACC GGCGATTCAG
GCGCTCACGG AGGTCATGGC GCGTCTTGCG CGCGAGGATT GA
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| Protein sequence | MTEQSKNPQP GHAARAYPLA DLTRALPPLT AFQAFVAAAE LGSFNRAAEH LCRTQGAVSR
QVQQLEAHYR CALFVRHPSG LTLTTEGDAL LTVAVDVLAQ LARHAHAHAH AASTLTLRLP
STFAIRWLLP RLSALNHALP RTELRIHTSA DDTPDFTDAD FDAIVVRGTG NWAGMVAVPL
FDEYLTPMCT CEVGASLQSV TDLARVTLLH PARNRDEWRC WLDAVGATQI DPRTGLVFDT
LELTLTAAAQ AHGVAIGDPR MAADRLAAGT LVAPFSEVVR NGLGYYLVYP VQRAAQPAIQ
ALTEVMARLA RED
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