| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4450 |
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| Symbol | |
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| ID | 4313343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1389122 |
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| End bp | 1389964 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152290 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_776335 |
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| Protein GI | 115359197 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.241546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGC TGAGATTTGG CGACAAACAC CATGAGAAAC CGGGCCTGCT CGACGCGCAG
GGAACGATCC GCGACCTGTC GGGCGTGATC GACGATATCG CCGGCGACGC GCTGACGCCC
GCGTCGCTCG TACGGCTGCG CGACATCGAC CCGTCGTCGT TGCCGCGCGT CGAAGGCACG
CCGCGGCTCG GCGCATGCGT CGGCCGCGTC GGCAAGTTCA TCTGCATCGG GCTCAATTAT
TCCGACCACG CGGCCGAATC GGGCATGGAG GTGCCGAAGG AGCCGGTCGT GTTCGGCAAA
TGGACGAGCG CGATTTCGGG GCCGAACGAC GACGTCGAGA TTCCGCGCGG CTCGGAGAAG
ACCGACTGGG AAGTCGAACT CGGTGTCGTG ATCGGCCAGG GCGGCCGCTA TATCGACGAA
GCCGACGCGC TGTCGCACGT CGCCGGCTAC TGCGTGGTGA ACGACGTGTC GGAGCGCGAA
TACCAGCTCG AGCGCGGCGG CACGTGGGAC AAGGGCAAGG GCAACGACAC GTTCGGCCCG
CTCGGCCCTT GGCTCGTGAC GGCCGACGAA GTGCCCGATC CGCACGCGCT GCGGCTGTGG
CTGGAGGTGG ACGGCCACCG CTACCAGAAC GGCACGACCG CGACGATGGT GTTCCGCGTG
CCGCACCTGA TCAGCTACCT GAGCCGCTTC ATGAGCCTGC AGCCGGGCGA CGTGATCTCG
ACCGGCACGC CGCCGGGCGT CGGGCTCGGC CAGAAGCCGC CCGTCTATCT GCGTGCCGGG
CAGGTGATCA CGCTCGGCAT CGACGGGCTC GGCGAGCAGC GCCAGCGCAC CGTGCAGGCC
TGA
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| Protein sequence | MKLLRFGDKH HEKPGLLDAQ GTIRDLSGVI DDIAGDALTP ASLVRLRDID PSSLPRVEGT
PRLGACVGRV GKFICIGLNY SDHAAESGME VPKEPVVFGK WTSAISGPND DVEIPRGSEK
TDWEVELGVV IGQGGRYIDE ADALSHVAGY CVVNDVSERE YQLERGGTWD KGKGNDTFGP
LGPWLVTADE VPDPHALRLW LEVDGHRYQN GTTATMVFRV PHLISYLSRF MSLQPGDVIS
TGTPPGVGLG QKPPVYLRAG QVITLGIDGL GEQRQRTVQA
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