Gene Bamb_4429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_4429 
SymbollivG 
ID4313322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1363790 
End bp1364563 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content67% 
IMG OID638152269 
Productleucine/isoleucine/valine transporter ATP-binding subunit 
Protein accessionYP_776314 
Protein GI115359176 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000108866 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCGA ATGCAGAACT GTTGAAGGTC GCCGGGCTGC AGATGCGCTT CGGCGGGTTG 
CTCGCGGTGG ACGGCATCGA TTTCGACGTG CGCCGCAACG AGGTGTTCGC GATCATCGGG
CCGAACGGTG CGGGCAAGAC CACGGTGTTC AACTGCGTCG GCGGCTTCTA CAAGCCGACC
GGCGGCGACG TCGTGCTCGA CGGCCACGCG ATCGGCGGGC TGCCGAGCCA CAAGATCGCG
TTGAAGGGCC TGGTGCGCAC GTTCCAGAAC ATCCGCCTGT TCAAGTCGCT GACGGTCGTC
GAGAACTTGC TCGTCGCGCA GCATCGCAAG GTCAAGGCCG GGCTGCTGCC GGGCCTGTTC
TCGACGCCCG CCTATCGTCG CGCCGAGAAG GACGCGCTCG AACGCGCGGC CGTATGGCTC
GACCGGATGG GGCTGGGGTC GGTCGCCAAC CGGCCGGCCG GCACGCTGTC GTACGGGCAC
CAGCGGCGTC TCGAGATCGC GCGCTGCATG ATCACCGAGC CGCGTCTCTT GATGCTCGAC
GAGCCGGCGG CAGGCCTCAA CCCGCAGGAA AAGATCGAGC TACAGCACCT GATCGACAAG
CTGCGCCACG AGTTCGGCGT GTCGGTGCTG CTGATCGAAC ACGACATGAG CCTCGTGATG
GGCGTGTCGG ACCGCATCCT CGTGATGGAG CACGGCCGGC CGATCGTGAT CGGCACGCCG
GAAGCGGTCC GCAACGACCC GCGCGTGATC AAGGCGTATC TGGGGGAAGA GTGA
 
Protein sequence
MSANAELLKV AGLQMRFGGL LAVDGIDFDV RRNEVFAIIG PNGAGKTTVF NCVGGFYKPT 
GGDVVLDGHA IGGLPSHKIA LKGLVRTFQN IRLFKSLTVV ENLLVAQHRK VKAGLLPGLF
STPAYRRAEK DALERAAVWL DRMGLGSVAN RPAGTLSYGH QRRLEIARCM ITEPRLLMLD
EPAAGLNPQE KIELQHLIDK LRHEFGVSVL LIEHDMSLVM GVSDRILVME HGRPIVIGTP
EAVRNDPRVI KAYLGEE