| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4391 |
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| Symbol | |
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| ID | 4313285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1330599 |
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| End bp | 1332455 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638152231 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_776277 |
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| Protein GI | 115359139 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities
[COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.21601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGTC CGAGTCGCGC CTTCCTCCCG AATTCCCTAA GCCCCGAATC CCTGAACGAC
GGACTCACGA TGCAGCCTCT TTCCGACGAA GCGCCGCTGG CCCTGTTCGA ATTACTTCAC
AGCGAGACGG CCGTCGCCTC CGGCGACCTG ACGCTCGCGG TCAGGACCTG GGGCGACCCG
GCCCGCTCGC CGGTCGTGCT CGTGCACGGC TACCCCGACG ACAGCAGCGT CTGGCAGCAC
GTCGCGCCGC TGCTCGCGCG CAAGCACTAC GTGATCGCCT ACGATGTGCG CGGCGCGGGC
CTGTCCGGCG TGCCGAAGCG CACGGCCGAC TACCACCTCG CGAAGCTGAC CGACGACTTC
ATCGCGGTGA TCGACACGCT CTGCCCCGGC CGCGCGGTGC ACCTGATCGC GCACGACTGG
GGCGCGATCC AGGGCTGGGA ATTCGTCACG GATCCGCGGC TCGCCGGCCG CATCGCGTCA
TACACGTCGT GCTCGGGGCC GTGCCTCGAC CACGTCGGCT TCTGGCTGCG CGAACGCGTG
CTGCGGCCGA CGCCCGCGTC GTTGGCCAAG CTGGGCGGCC AGCTCGTGCG CTCGTGGTAC
GTGGTCTTAT TCCACCTGCC GTTCATCCCC GAGCTGAGCT GGCGGCTGTG GCTCGGCCGC
GCATGGCCGC GCCTGCTGCG CCGGATCGAG AAGACGCCGG CTGCCCCGCG CGCGACGCAG
GCCGACGACG GCGCGCACGG CGTGCGCCTC TATCGCGCGA ACTTCATCCG CTGCCTGTTC
GCGCCGCGCG AGCGCTACGC GCACGCTCCC GTGCAGACGA TCGTGCCGCT CGGCGACAAG
TACGTGAGCC CAGCGCTGTC GGAGAACCTG TCGCGCTGGG TGCCGCAGTA CTACCGCCGC
GAAGTCGCGG CCGGCCACTG GCTGCCGCTC GCCGATCCCG CGCGCTTCGC GGGCCTCGCC
GAGCAGCTGA TCGACGCGGT CGAATCGGGC GACGAGCCGC CCGCGCTCGC GAACGCCCGC
CGGCGCGCCA CCAGCGGCCG CTTCAGCGGC AAGGTCGTGG TCGTCACCGG CGCGGGGAGC
GGCATCGGCC GCTGTGCGGC GCTCGCGTTC GCCCGCGAAG GCGCGACCGT CGTCGCGTGC
GATATCGAGC TCGCGAGCGC CGAGCGCACC GCGCTGCTGC TCGGGCTGAT CGGCGCGCAG
ACACACGCGA AATGCGTGGA CGTCGGATCC GCCGACGAGA TGGAAGCGCT CGCGACGTGG
GTCGGCAGCG AACTCGGCGG CGCGGACGTC GTGATCAACA ACGCGGGCAT CGGCATGGCC
GGCGGCATTC TGGACACGAC CGCCCACCAC TGGGAGCGCA TCCTGCACGT GAACCTGTGG
GGCGTGATCC ACGGCTCGCG ACTGTTCGCC CAGCAGATGG CGGCGCGCGG CACCGGCGGC
CACATCGTCA ACACCGCGTC GGCCGCCGCG TTCGGGCCGT CGCGCGACCT GCCCGCATAC
GCGACGACGA AAGCCGCCGT GCTGATGCTC AGCGAATGCA TGCGTGCGGA ACTCGCGGAG
AAAGGCATCG GCGTGACGGC CGTGTGCCCG GGCTTCGCGG AAACCGGAAT CATGGCGTCG
ACGCAATACG CGGGCGCCAA CGCTCAGGAC GAGGCGCGGC TGCGCAAACG CGCGACGAAG
CTGTACCAGA TGCGCGGCCT GAAGCCCGAG ACCGTCGCGC AGGCGATGGT CGATGGCGTG
CTGCGCAACC GGCCGGTCGT GGCAGTAGGC GCCGAGGCGC ATGCGCTGCG CATCGTGGGC
CGCTTCATGC CGTGGCTCGG CCGGATGCTC GCCCGCATCG GCATGGCATC GCATTGA
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| Protein sequence | MTRPSRAFLP NSLSPESLND GLTMQPLSDE APLALFELLH SETAVASGDL TLAVRTWGDP
ARSPVVLVHG YPDDSSVWQH VAPLLARKHY VIAYDVRGAG LSGVPKRTAD YHLAKLTDDF
IAVIDTLCPG RAVHLIAHDW GAIQGWEFVT DPRLAGRIAS YTSCSGPCLD HVGFWLRERV
LRPTPASLAK LGGQLVRSWY VVLFHLPFIP ELSWRLWLGR AWPRLLRRIE KTPAAPRATQ
ADDGAHGVRL YRANFIRCLF APRERYAHAP VQTIVPLGDK YVSPALSENL SRWVPQYYRR
EVAAGHWLPL ADPARFAGLA EQLIDAVESG DEPPALANAR RRATSGRFSG KVVVVTGAGS
GIGRCAALAF AREGATVVAC DIELASAERT ALLLGLIGAQ THAKCVDVGS ADEMEALATW
VGSELGGADV VINNAGIGMA GGILDTTAHH WERILHVNLW GVIHGSRLFA QQMAARGTGG
HIVNTASAAA FGPSRDLPAY ATTKAAVLML SECMRAELAE KGIGVTAVCP GFAETGIMAS
TQYAGANAQD EARLRKRATK LYQMRGLKPE TVAQAMVDGV LRNRPVVAVG AEAHALRIVG
RFMPWLGRML ARIGMASH
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