| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4301 |
|---|
| Symbol | |
|---|
| ID | 4313196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 1228339 |
|---|
| End bp | 1229820 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638152142 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_776188 |
|---|
| Protein GI | 115359050 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0574645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTG TCCGGAAGCA AAATGCGCAA ATCGAGCAAT TACAGGCGGA AATGCGCGAT
CTACGCATGC AGGTTAACCA GCAAATGCCC GCATCGCGTT CCGCATTGAC CGATTCGATG
GCGTCGACGA GTACTGACTT CCCTGAATCC GGGAACTCGT CGCGCAAGGC CGAAGCCATC
GCGCGCCGCA AAGCCGATAC GGCTCCAGGA GCGGAGGTCG CTAGCGTGAC ACCGTCGGGC
GCACTCGACA CGATCGCGCC TCCGGCACTC TATTCAGGCA TGATCCCGGA TTTGACACTC
GGCCGCGTAG TCACGCGGTT GCGCGGTGAT GTGGTTGTCG AGGGGGGATA CGTAAGCCAG
GCTAACGACT CTCATCTCAA CTCGAGTGCG GTACGGGAGC GCTTCAGATT TATCGTCAAC
CCTGAAGTGC AGGCTAACGG CGGATTCAGT TATGGCGGTC TCGTTCGTTA CGTTGTCGCG
AAGGGCGATC AGAGCGTCAA CGCACCAGAC CGCACGTTTC TATACGCGCG AGGACCCTAT
GGTGATTTCA GCGCTGGCGT TCGCAATGGC TATGGCGACG AGAGCTACTT TCCGTTCGCG
CTTGATTACT TGCCTACCGG CCGCTTCGAC ACTGCGCTCG GCTTCATGGT GCCCAACGGC
GGCACGACAG GAGGAGCACA AGGCGTAGAT GCGATCAATG GCCGGTACCA GGGTGCGGAC
ATCGGCGGCG GTGTAATGGG GGCACTGATG GGTACGAGCG TCGTTTGGCC GGCGCTTGCG
GTTGACAACA ATGCGAGCAA GGTGATGTAC ATGTCGCCCC GCTTCGCCGG GTTCCGCTTC
GGCTTCGATT GGACGCCCCG GAACGACGCG TACGACATTA GTACCAATCG GCTCAATTAC
ACGACGTCTA CCGCGCTCAC CGGGGCTGGT TATGACGCAG TTTTCCGCAA TCTGATTGAA
GTCGGTTTCG ACTACGATCA GAAATTCGGT GACGTGAGAC TGTTGGGTAA CTTCGTTTAT
ATGACTGGCA AGTCCGTTCC AACGGCGACG ACCGTGGGCG GCACGTTCTA CGATCTCAGG
GCCTATCAGG CCGCATTCCG CGTCGAGTAC GGCGGCTTTG CAATCGGACC GTCCGTGCTC
TATCTGGGCA AGAGCGCCCA GCAAAAGCAT GGCACGGCAA GCTCCCCGAT CTATAACGCG
AATACCTACA ACTATTCGCT CGAAGCTCAG TACCGCTTTG GTCGGTGGGT CGTAGGCGGC
GCATATCGCT ACGGACAGGA TCCGGGACAA ATGACACTCC CCGGTGCACG GACGTTGCGC
GTGTACGAAC TGGGTGCGGC ATACACGCTG TGGAAAGGCA TGCAGTTGCA GATGACATAT
GACCATTTTG TTGCGCACAG CGACAAGGCA ACGACCGCGA CGTCCGGCAG CCCGAGCGAT
CGTGGTGACG TTATCACTGC ACGTGCCGTC TTCCGCTTCT AA
|
|---|
| Protein sequence | MELVRKQNAQ IEQLQAEMRD LRMQVNQQMP ASRSALTDSM ASTSTDFPES GNSSRKAEAI
ARRKADTAPG AEVASVTPSG ALDTIAPPAL YSGMIPDLTL GRVVTRLRGD VVVEGGYVSQ
ANDSHLNSSA VRERFRFIVN PEVQANGGFS YGGLVRYVVA KGDQSVNAPD RTFLYARGPY
GDFSAGVRNG YGDESYFPFA LDYLPTGRFD TALGFMVPNG GTTGGAQGVD AINGRYQGAD
IGGGVMGALM GTSVVWPALA VDNNASKVMY MSPRFAGFRF GFDWTPRNDA YDISTNRLNY
TTSTALTGAG YDAVFRNLIE VGFDYDQKFG DVRLLGNFVY MTGKSVPTAT TVGGTFYDLR
AYQAAFRVEY GGFAIGPSVL YLGKSAQQKH GTASSPIYNA NTYNYSLEAQ YRFGRWVVGG
AYRYGQDPGQ MTLPGARTLR VYELGAAYTL WKGMQLQMTY DHFVAHSDKA TTATSGSPSD
RGDVITARAV FRF
|
|---|
| |