| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4298 |
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| Symbol | |
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| ID | 4313193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1222393 |
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| End bp | 1224891 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638152139 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_776185 |
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| Protein GI | 115359047 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.192425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAGA GCAATCAATT GCCGTTCAGC GGTGTGAAAG TCATCGATTT CGGCCAGTAC
ATTGCGGGGC CAGCGGTCGC GATGATCCTC GCGGATCTGG GTGCGACCGT CATTCACGTC
GATCCTCCAG CCGGGCCGCT TTGGGATAGC CCGGCCAATG CGGTGCTCAA CCGCGGCAAG
CATTGCCTGC GGCTCGACCT GAAGACCGAC AAAGGCCTGG AAGAAGCCAA AGATCTGATT
CGGCGCGCGG ACGTTGTCAT CGAGAACTTT CGGCCGGGCG TGATGGCGCG GCTGGGTCTT
GATTTCGCGA AGTTGCGTGA AGCACGCCCG CAACTGATCA CGCTCTCGAT GCCAGGCTTT
GCCAGCAACG ACCAGTTACG TCGCGAATGG CGCGCGTTCG AGCCGATCAT CGCGTCCGCT
TCGGGCGTAT TTACGGACAT GGGGCAGAAC CGCGTGCTGA TGGGCATCAA TCCGAGTTTC
TCGCCTTTGC CGCTCGCGTC CGCCTACGGC ACCATGCTGG CCGTCTCGGC TGTCGCGCTT
GCGTTGCAGG CGCGGCAGCG CACAGGCGTG GGAGATGAAA TCGAGGTCCC TCTGGCATCG
GCTGTGATGG AGGGGCTCTC CTACAACTCG ATCCATATCG AGAACTACCC CGAGCGATAC
AAGACCCTGC GCGAAAAGGA AATCGAGCGG CGGCGCTCCA ACAATCTACC GATGGATCTG
TCGTACGAAG CGCTGCAGGA ATATCTGGAT CCGTTCTACC GGACCTATGA GTGTGCTGAC
GGCCGCAAGT TTTATGCAGT GTGCCCGTCA CATCGCTCGC ATGCACGCCG CTGCCTGCAG
GCGATGGGGC TGTACGAGGA AATGCTGGAA GCCGGCTTGC CGCGGATCGA CGATCCGTAC
CTGCCGATTT CCGAATGGGA AGGGAACGCG TCGCTAGGGG TCTATCCGTT ACCCGAGCAG
TGGGCGAAGC GGATTTCCGC GCGTATGAAG GAAGTTTTTC GTACGAAAAC AGCAGCCGAG
TGGGAAAAGA TTTTCGGCGA AGGAGGTTTC CCTGGAGCGG CACACCGGAC CACGCGGGAG
TGGCTGCATG ACGACCACGC GAATACTGCC GGCCTGGTCG TGAATGTCGA CGATCTCGAA
TATGGTGTGA TGAAGCAGCC TGGGCCGGTC GCATGGCTTG AAGACTGTGC CGAATCCATG
CTCTCGCCGG CGTCCCGCCA TCCGGTGACC TTCCGGGATG CGTTAGCCAT TCTGGATGAG
CAGGAGCGTA CTGAGCTGCC TGCTCCGTCG GGAACGCCCA CACAGGGGTG GCTCGACGGG
GTGCGTGTGC TCGACCTGAC GAACGTGATC GCCGGGCCCC ACTCGGCGTC GTTTCTCGGC
CGGTTTGGTG CCGATGTCAT CAAACTCGAC CCCGTCGTGC CGAATTATGA TCCGTGGAAT
ACGGTGGTCT TCGGGATGTC GTCGGCGCGA GGGAAGCGGA GCGTGCTCGT CGATCTGAAC
CATCCGGATG GACGCGAGGT GTTCGCTCGA CTCGCGCGGT CTGTCGATGT GATCGTCATG
AATGCCCCGG ATCGTCAGCT TGAACCGCTG GGGCTGGACG AGGCGACCCT CCGTTCCATC
AATCCCGGCG TGATCTTCTG CCAGCTCGAC TGCTTCGGCG GTCCTCGACG CGGGCCGCGG
ACCGACTACC TTGGCTACGA CGATCTGATC CAGGCGTGCA CCGGAATCAT GGTGCGATTC
GGTGGCGGCA TGGAGACGCC GGAGGAGCAT GCGCATGTCG GAACGATCGA CGTCATGTGT
GGATTCGCGG CTGCACTGGG TGTGGCTGCC GCGCTTTACC GCAAGGCGAA AACAGGCGAG
GTCGGCCGCG CGAGAACTTC CTTGTCGGCG CTTGGCAATC TGGTGCAGAT CCCGTTCTCG
TATGACTATG CGAATCGCCC GCCATTCGAC GAGCCGTCCG GCCGCGAGGC GATCGGCTAT
GGCGCGATGT CCCGATTCTT CCGGGCCGCG GACGACTGGA TCTATGTGCA CACCAGCGAG
AATGAGCTGG ACGAACTGGA TCGAGTAGAA GGTCTGGCCG GAATTGCGGC AGCCAAGGAC
CCGGCTGCAT TCCTCGCGTC TGCGCTTGGC ACCGCGTCCG CCGCGTCTTG GCAGACCCGG
TTGCAGGCCG CCAATATCGC GGCGGCGGTG CCTGACAACA TCGTCAACCT CCGCCGGCAC
AATAGTCGGC CCTGCGACGA TCGCCCAGGT ATCGACAACG GCAGCTATTC GTTCAGCGTC
TATGCGAACC ATCCTAGCGG TCGATGCGTC ACGCAGCTCG ATCCTTTCGC GATTCGTCCG
CGCCATGCCC GGATTCGCGC CTTGGCACCG GCCGAAAAAT TCGGCGCATC GACCTACGCC
GTCCTGCGCG AGTTCGGATA CAGCGATGCC GAGATCGAGA TACTGATTGC CCGACATGCG
GTCGGCGATA GCTGGTCCGA AGAGTATTTG CCCAGCTAG
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| Protein sequence | MGKSNQLPFS GVKVIDFGQY IAGPAVAMIL ADLGATVIHV DPPAGPLWDS PANAVLNRGK
HCLRLDLKTD KGLEEAKDLI RRADVVIENF RPGVMARLGL DFAKLREARP QLITLSMPGF
ASNDQLRREW RAFEPIIASA SGVFTDMGQN RVLMGINPSF SPLPLASAYG TMLAVSAVAL
ALQARQRTGV GDEIEVPLAS AVMEGLSYNS IHIENYPERY KTLREKEIER RRSNNLPMDL
SYEALQEYLD PFYRTYECAD GRKFYAVCPS HRSHARRCLQ AMGLYEEMLE AGLPRIDDPY
LPISEWEGNA SLGVYPLPEQ WAKRISARMK EVFRTKTAAE WEKIFGEGGF PGAAHRTTRE
WLHDDHANTA GLVVNVDDLE YGVMKQPGPV AWLEDCAESM LSPASRHPVT FRDALAILDE
QERTELPAPS GTPTQGWLDG VRVLDLTNVI AGPHSASFLG RFGADVIKLD PVVPNYDPWN
TVVFGMSSAR GKRSVLVDLN HPDGREVFAR LARSVDVIVM NAPDRQLEPL GLDEATLRSI
NPGVIFCQLD CFGGPRRGPR TDYLGYDDLI QACTGIMVRF GGGMETPEEH AHVGTIDVMC
GFAAALGVAA ALYRKAKTGE VGRARTSLSA LGNLVQIPFS YDYANRPPFD EPSGREAIGY
GAMSRFFRAA DDWIYVHTSE NELDELDRVE GLAGIAAAKD PAAFLASALG TASAASWQTR
LQAANIAAAV PDNIVNLRRH NSRPCDDRPG IDNGSYSFSV YANHPSGRCV TQLDPFAIRP
RHARIRALAP AEKFGASTYA VLREFGYSDA EIEILIARHA VGDSWSEEYL PS
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