Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4256 |
Symbol | |
ID | 4313151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 1181002 |
End bp | 1181694 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638152097 |
Product | hypothetical protein |
Protein accession | YP_776143 |
Protein GI | 115359005 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00915511 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGACGCGA ATTTCATCGG CTCGGTCATT AACGCTTTAC CCATGGACCA AATGATCGCC GGCCCTTTAA AGGCGATGAT CAGCGCGCAG ACGCAGGCCG CGAAGAGCTA CGCGGATTTC CTGATGCAGG TCTGCATCCA GGGCGGCAAG GCCGTGGCCG TCCAGTTCGA CTACGACGAG ACGCTGGTGG ACGAAAGCGG CGTGTCGAAA GGCGTCGTGC AAAAGACCAT GCGCATCCCG CTGCTCGCGG CGATCGTCCA CCCGATCATC GCGATCGAGG AGGGCACGAT CGACTTCGAG ATGGAAATCA CGCAGTCGGA GAAGTCGTCG TCGTCGACCG AGGCTGGCGG CGAATTCCAG GCGAAGCTCG GCTGGGGGCC GATCAGCGTC AGCGTGTCGG GGCGCGTGTC GCACAAGGCG GAGCAGACGC GCAGCACCGA CACGCGCGCG AAATACTCGA TCCATACGCA GGTGAAGCGC CAGTCGCCGC CCGAAGCGCT GATGCGCGTG ATCGACTTCC TGACCGAAGC CGCGACCAAG CCGGTGGTCA CCGAAGGCAA CGCGAAGGAC GTGAAGCCGC TGCCGGCGAC GCCGACCGAC GGCAAGCTGG TCGGCGACGC GTCCGGATCG CGCGGCAGCG CGGCCGCGCC GGCCGCTGCC GGTGCGGATG CCCGGCAGCC GGCGCACGCG TAA
|
Protein sequence | MDANFIGSVI NALPMDQMIA GPLKAMISAQ TQAAKSYADF LMQVCIQGGK AVAVQFDYDE TLVDESGVSK GVVQKTMRIP LLAAIVHPII AIEEGTIDFE MEITQSEKSS SSTEAGGEFQ AKLGWGPISV SVSGRVSHKA EQTRSTDTRA KYSIHTQVKR QSPPEALMRV IDFLTEAATK PVVTEGNAKD VKPLPATPTD GKLVGDASGS RGSAAAPAAA GADARQPAHA
|
| |