| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4246 |
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| Symbol | |
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| ID | 4313141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 1171217 |
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| End bp | 1172455 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638152087 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_776133 |
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| Protein GI | 115358995 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0343876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCTCG ATTCCCGCCA GCTCGCGACG CTCGCGCAGC AATACGGCAC CCCGCTGTGG
GTGTACGACG CCGACGTCAT CCGCGACCGC ATCGCCCAAC TGCGTCAGTT CGACGTGATC
CGCTACGCGC AGAAGGCGAA CTCGAACCTG CATATCCTGA AGCTGATGCG CGACGAACGC
GTGTGCGTCG ACGCCGTGTC GCTCGGCGAG ATCGAGCGCA GCCTTGCTGC TGGGTTCAGT
CCGGCAGGCG ATCCGGAAGG CGTCGTGTTC ACGGCCGACC TGATCGACCG CCCGACGCTC
GCCGCCGTGC TGAAGCACGG CGTGACCGTG AACGCCGGCT CGCTCGACAT GCTGGCACGC
GTCGGCGAGC ACGCGCCCGG CCATCGCGTG TGGCTGCGCG TGAATCCCGG CTTCGGCCAC
GGTCACAGCA ACAAGACCAA TACCGGCGGC CCGCAGAGCA AGCACGGGAT CTGGATCGAC
GACGTGCCGC GCGCGATCGA AATCGTGCGC CAGTACGGGC TGAAGCTGGT CGGCATCCAC
ATGCATATCG GCTCGGGCGT CGACTATGGC CACTTGTCGC AAGTGTGCGA CGCGATGGTC
GACCTCGTCA CGTCGCTCGG CCACGACATC GAAGCGATCT CCGCGGGCGG CGGGCTGTCG
ATTCCGTATC GCGACGGCGA GCCGCGCGTG GACGTCAGCC ACTACTTCAG CCAGTGGGAT
GCCGCGCGCA AGCGGATCGA ACGGCATCTC GGCCATGCGG TGCGCATCGA GATCGAGCCG
GGCCGCTTCC TCGTCGCCGA GGCCGGCACG CTCGTCACCG AAGTGCAGGC CGTGAACCAC
CGGCCGAAGC ACGACTTCGT GCTGATCGAT GCGGGCTTCA ACGATCTGAT GCGTCCGTCG
ATGTACGGCA GCTACCACGC GGTGTCCGTG CATGCGCCGG ACGGCGCGCT GCCCGCCGGC
CGACCGCTCG TCGACATCGC GATCGCGGGG CCGCTGTGCG AATCCGGCGA CGTGTTCACG
CAGGACGCAG GCGGCGTGGT CACGCACCGC AAGCTCGCGC AACCGCAGAT CGGCGATCTG
CTGTTCCTGC ACGATGCGGG CGCGTACGGC GCATCGATGT CCTCGAACTA CAACAGCCGG
CCGCTCGCGC CGGAAGTGCT GATCGATCGC GGCACGCCGC GACTGATCCG CCGCCGGCAG
ACGATCGGCG AACTGCTCGC GCTCGAAACG TTCGAGTAA
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| Protein sequence | MSLDSRQLAT LAQQYGTPLW VYDADVIRDR IAQLRQFDVI RYAQKANSNL HILKLMRDER
VCVDAVSLGE IERSLAAGFS PAGDPEGVVF TADLIDRPTL AAVLKHGVTV NAGSLDMLAR
VGEHAPGHRV WLRVNPGFGH GHSNKTNTGG PQSKHGIWID DVPRAIEIVR QYGLKLVGIH
MHIGSGVDYG HLSQVCDAMV DLVTSLGHDI EAISAGGGLS IPYRDGEPRV DVSHYFSQWD
AARKRIERHL GHAVRIEIEP GRFLVAEAGT LVTEVQAVNH RPKHDFVLID AGFNDLMRPS
MYGSYHAVSV HAPDGALPAG RPLVDIAIAG PLCESGDVFT QDAGGVVTHR KLAQPQIGDL
LFLHDAGAYG ASMSSNYNSR PLAPEVLIDR GTPRLIRRRQ TIGELLALET FE
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