| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4237 |
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| Symbol | |
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| ID | 4313132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 1161766 |
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| End bp | 1163520 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638152078 |
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| Product | Alpha,alpha-trehalase |
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| Protein accession | YP_776124 |
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| Protein GI | 115358986 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1626] Neutral trehalase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.289952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCAC GTCGTGCCGC ATCGATCGCA TCGCATCCTG CTTCACACTC GCACTCGCAC
TCGCACTCGC ACTCGCACTC GCACTCGCAC TCGCATTCAT TCGCGCGCGC GCCGCGCATG
CGCTGGGCCG CCGTCCTGGC CGTCGCGTAC CTGGCCGTCG CCGGATGCGC GGCGCAAGCC
GACAGCGCGA ACCACGCGGC CACGCAGGCA GCTGTGCCGG CCTCGGCCGC GCTCGCGAAT
CCGGCGTCCG GCGGCACGCT GCTGCCGCCG CCGAGCCAGC TCTACGGCGA CCTGTTCGTC
GCGGTGCAGA CCGCGCAGCT CTATCCCGAC CAGAAGACCT TCGTCGATGC GACGCCCGAT
ACCGATCCCG CGACCATCAT GCAGTTGTAT CAGCAACAGA AGTCGCAGCC GGGCTTCTCG
CTGAAGGCGT TCGTCGACCA GCACTTCACG CCGCCGCCGG CAGGCGGCGT CACGCCGCCC
GCGAACCAGA CGCTGCGCCA GCACATCGAC TGGCTGTGGC CGCAACTCAC GCGCACCAGC
ACGACGGTGC CGCCGTACAG CTCGCTGATC CCGATGCCGA AGCCGTACGT GGTGCCGGGC
GGCCGCTTCC GCGAAGGCTA CTACTGGGAT ACCTATTTCA CGATGCTCGG GCTGCAGGTG
TCGGGGCGCG AGGATCTCGT CGACGACATG CTCGACAACT TCGCGCATCT GATCGACACG
ATCGGCCACA TCCCGAACGG CAACCGCACG TACTACGCGA GCCGCTCTCA GCCGCCGTTC
TTCGCGTACA TGGTCACGCT CGCCGCACAG GCCGAAGGCG ACAAGGTCTA CCAGAAATAC
CTGCCGGCGC TGCGCAAGGA GTATGCGTAC TGGATGCATG GCGAAACCAC GACGCCGCGC
GGGCAGGCCG CGCGCCACGT GGTCGCGATG CCGGACGGCG CGGTGCTGAA CCGCTACTGG
GACGCGAGCG ACACGCCGCG CGACGAGTCG TATCTCGAGG ACGTGACGAC CGCGAAGGCT
GTGCCCAATC GCCCCGCGAA CGAGGTGTAC CGCGACCTGC GCGCAGGCGC CGAAAGCGGC
TGGGATTACA GCTCGCGCTG GTTCGGCGAC GGCAAGACGC TCGCGACGAT CCGCACGACG
TCGATCGTGC CGGTCGACCT GAACAGCCTG ATGTTCCATC TCGAGACGAC GATCGTGAAG
GGCTGCGCGG TCACGCACGA CATCGCGTGC GTCGCGGACT TTTCCGCACG GGCGGGCCGC
CGCGCGGCCG CGATCAACCA CTATCTGTGG AATCGTCGCG GCTATTACGG CGACTACGAC
TGGCAGTTGC GCAAGCCGCG CGACGGCGTG ACGGCCGCCG CGCTGTATCC GCTGTTCACG
AGCGTCGCGT GGCCCGAGCG CGCGAAGGCG ACCGCGCGCG AGGTGCGCAA GACGCTGCTG
CAGCCGGGCG GCCTCGCGAC GACGACCGTG AACACCGGCC AGCAGTGGGA TGCGCCGAAC
GGCTGGGCGC CGCTCCAGTG GATCGCGATC GACGGGCTGC GCCGTTACGG CGACCCGGCG
CTCGCGAAGG ACATCGGCAC GCGCTTCCTG ACCGACGTGA AGCATGTGTA TGCGACCGAA
GGCAAGCTCG TCGAGAAGTA CGTGGTCGAG GGGACGGGCG CGGGCGGTGG CGGGGGCGGC
GAATATCCGC TGCAGGACGG CTTCGGCTGG ACCAACGGCG TCACGCTGAA ACTGCTCGGG
CTGTATGGCG AGTGA
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| Protein sequence | MMSRRAASIA SHPASHSHSH SHSHSHSHSH SHSFARAPRM RWAAVLAVAY LAVAGCAAQA
DSANHAATQA AVPASAALAN PASGGTLLPP PSQLYGDLFV AVQTAQLYPD QKTFVDATPD
TDPATIMQLY QQQKSQPGFS LKAFVDQHFT PPPAGGVTPP ANQTLRQHID WLWPQLTRTS
TTVPPYSSLI PMPKPYVVPG GRFREGYYWD TYFTMLGLQV SGREDLVDDM LDNFAHLIDT
IGHIPNGNRT YYASRSQPPF FAYMVTLAAQ AEGDKVYQKY LPALRKEYAY WMHGETTTPR
GQAARHVVAM PDGAVLNRYW DASDTPRDES YLEDVTTAKA VPNRPANEVY RDLRAGAESG
WDYSSRWFGD GKTLATIRTT SIVPVDLNSL MFHLETTIVK GCAVTHDIAC VADFSARAGR
RAAAINHYLW NRRGYYGDYD WQLRKPRDGV TAAALYPLFT SVAWPERAKA TAREVRKTLL
QPGGLATTTV NTGQQWDAPN GWAPLQWIAI DGLRRYGDPA LAKDIGTRFL TDVKHVYATE
GKLVEKYVVE GTGAGGGGGG EYPLQDGFGW TNGVTLKLLG LYGE
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