Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4018 |
Symbol | |
ID | 4312913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 935719 |
End bp | 936789 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151859 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_775905 |
Protein GI | 115358767 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0210654 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACTC CCGCCTCCTC CCTCGAAGCA CTGCGCACGC TGCCCGCGCG GCGCCCGGCC GTTCGCTGGG CACTGCGCGT GCTGCGCTGG GCGCTCACGC TCGCCGTCAC GTTCGCGGGC CTGCTCGCGC TAACGTTCGT GATCGGCCGC AAGGTGCCGA TCGATCCCGT GCTCGCGATC CTCGGCGATC GCGCGTCGGC CGAGGCGTAC GCGGCCGAGC GCATCGCGCT CGGTCTCGAC AAGCCGCTCG TCACGCAATT CCTGATCTAC GCGCGCGACG TGCTGCACGG CAATCTCGGC ATGTCGCTGC TGACGTCGAA CCCGGTGCTC GACGACATCA GGCGCGTCTT CCCCGCCACG CTCGAACTCG CGACGATCGC GACCCTGATC GGCATCGCGC TCGGCGTGCC GCTCGGCGTC GCGGCCGCGG TGAAGCACAA CCGGCCGATC GACCACATCG CGCGCTTCGT CGGCCTGATC GGCAATTCGG TGCCGGTGTT CTGGCTCGGG CTGATGGGGC TGCTGCTGTT CTATGCGCGG CTGCACTGGG TCGGCGGCCC CGGCCGGCTC GATCCCGTGT ACGACGGCAT GGTCGACCCG CGCACCGGCA GCCTGCTGCT CGACTCGGCG CTCGCGGGCG AGTGGGACGT GTTCCGCAAC GCGGTGTCGC ACATCGCGCT GCCAGCCGCG ATCCTCGGCT ACTACTCGGT CGCGTACCTG AGCCGGATGA CGCGCTCGTT CATGCTCGAC CAGCTGAGCC AGGAATACAT CGTCACCGCG CGCGCGAAGG GCCTGTCCGA GCGCCGCGTG ATCTGGCGGC ATGCGTTCGG CAACATCGCG GTGCCGCTGC TCACCGTGAT CGCGCTCACG TACAGCAACC TGCTCGAAGG CTCGGTGCTG ACCGAGATCG TGTTCGCGTG GCCGGGGCTC GGCTCGTACC TGACGGGCGC GCTGCTGAAC GCCGACATGA ACGCGGTGCT CGGCGCGACG CTCGTGATCG GCGTGATGTT CATCACCGTC AACCTGCTGA CCGACGCGCT GTATCGCGTG TTCGATCCGC GTGCGCGCTG A
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Protein sequence | MSTPASSLEA LRTLPARRPA VRWALRVLRW ALTLAVTFAG LLALTFVIGR KVPIDPVLAI LGDRASAEAY AAERIALGLD KPLVTQFLIY ARDVLHGNLG MSLLTSNPVL DDIRRVFPAT LELATIATLI GIALGVPLGV AAAVKHNRPI DHIARFVGLI GNSVPVFWLG LMGLLLFYAR LHWVGGPGRL DPVYDGMVDP RTGSLLLDSA LAGEWDVFRN AVSHIALPAA ILGYYSVAYL SRMTRSFMLD QLSQEYIVTA RAKGLSERRV IWRHAFGNIA VPLLTVIALT YSNLLEGSVL TEIVFAWPGL GSYLTGALLN ADMNAVLGAT LVIGVMFITV NLLTDALYRV FDPRAR
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