| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4014 |
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| Symbol | |
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| ID | 4312909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 930670 |
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| End bp | 931926 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638151855 |
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| Product | oxalate decarboxylase |
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| Protein accession | YP_775901 |
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| Protein GI | 115358763 |
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| COG category | [G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03404] bicupin, oxalate decarboxylase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.553342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC TTTCTCGACG CAGGATGTTG ACGAGTACGG CCGGCGCGAT TGCCGCCGCG
GGCATTGCGG TAACGGCCAA GGCGGCTTCG TTCGGCAATC CGGACAGCCC GCCGGAAGGG
GCGATCAACG CGCGCAACAA GCAGGGATTG ACCGACCCGG GGCCGAAGAA TCCCGCATTG
GCGAATCAAT TCCCGTCTTT CCAGGATCCG CCGGCCACCG ATATCAACGG CATGCCGTTA
TTCTGGGCGT CATTCAATAA CGCGCATAAA CGCATTCAAA ACGGCGGATG GGCACGCGAA
GTCACGCAGG ACGATTTCGC GATTTCGGAA ACCATTTCCG GCGTGAACAT GCGGTTGACG
CGCGGCGGCA TTCGCGAGAT GCACTGGCAC CAGCAGGCCG AATGGGCAAT CATGCTCGAC
GGCCGCTGCC GGATCACCGT GCTCGACGAA CTGGGACGCC CGTCGGTGCA GGACGTGAAA
ACCGGCGATC TCTGGTATTT CCCGCCCGGC CTGCCGCACT CGCTGCAAGG AATCGGCACC
GACGGCGCCG AATTCATGCT CGCCTTCGAC AACGGCCGCG CGTCCGAATT CAACACGCTG
CTGCTGACCG ACTGGGTAGC GCACACGCCG CCGGACGTGC TCGCGCTCAA CTTCGGCGTG
CCGGCCGACG CGTTCAAGAA CATTCCGCTC GACAACCTGT GGATCTTTCA GGGCGACGAG
CCGGGGCCGC TCGCGGACGC CCAGCGTGCG TCCGCGTCTT CGGCCGGTGC GCCGCCGCAC
CCGTTCATCT TCTCGCTCGG CGCGATGAAG CCGTTCAAGA AGACGCGCGG CGGCGAGGTG
CGAATTGCCG ACAGCACGAA CTTCAACGTA TCGCAAACGA TTGCGGCGGC GCTCGTCACC
GTGCATCCGG GCGGCATGCG CGAGCTGCAC TGGCATCCGA ATGCCGACGA ATGGCAGTAC
TACCTGCAGG GCGAAGCGCG GATGACCGTG TTCGACACGG GGCCGAAGGC GCAGACGGCA
GACTTCCGCG CGGGCGACGT CGGTTACGTG AAAAAGAGCC TCGGACACTA CGTGCAGAAC
ACCGGCAACA CCGATCTCGT GTTCCTCGAA ATCTTCAAGA CCGACCGCTA TGCGGAGGTG
TCGCTGTCCG ACTGGCTCGC GCACACGCCG CCGAAGCTCG TCGAGGCACA CCTGAATATC
GCGCCTGACG TGCTTGCGCG GTTTCCGCGC AATCGTCCGG ATGTCATGCC GCTGTAA
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| Protein sequence | MTNLSRRRML TSTAGAIAAA GIAVTAKAAS FGNPDSPPEG AINARNKQGL TDPGPKNPAL
ANQFPSFQDP PATDINGMPL FWASFNNAHK RIQNGGWARE VTQDDFAISE TISGVNMRLT
RGGIREMHWH QQAEWAIMLD GRCRITVLDE LGRPSVQDVK TGDLWYFPPG LPHSLQGIGT
DGAEFMLAFD NGRASEFNTL LLTDWVAHTP PDVLALNFGV PADAFKNIPL DNLWIFQGDE
PGPLADAQRA SASSAGAPPH PFIFSLGAMK PFKKTRGGEV RIADSTNFNV SQTIAAALVT
VHPGGMRELH WHPNADEWQY YLQGEARMTV FDTGPKAQTA DFRAGDVGYV KKSLGHYVQN
TGNTDLVFLE IFKTDRYAEV SLSDWLAHTP PKLVEAHLNI APDVLARFPR NRPDVMPL
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