| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3974 |
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| Symbol | |
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| ID | 4312870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 873476 |
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| End bp | 876757 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638151816 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_775862 |
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| Protein GI | 115358724 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.361688 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0160055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTAA CGCTGCCGCC GTTGCTCGGC ATAGATATAA AATTTGCGAA AGGATCAGTC
AGGCAGTTGA CGGAGGCTTC CAGAACATTG GAAGCCCAGA TGATGCGATT TGCGCTCCCG
TCTGCGCTAG GGTGGAAGTT TGAGACCGCT TTAGGTGAAA TCATTTACCT ATTTCAGCGC
GTACCCGTGG AGGCGGAGAT GCCCTCGGAC GGCGCGGTGC TGGTAGGACA CGTTCCGGAA
GCGGCTGAGG AAATCGACCT TCGAAATGCT AAGTGGATAC CTCGAAAGGG ATCGATGGCA
GGTAATCCTG TTGCTGAAGC GCTTAATAGT TGGCGAAACG CGTTTAAGTA TATTAGCGAA
GACGAAGCTG GTTTCGGAAG GATTGGCCTG CGTAAGCCGC AGATCGGAGC GCTCCACGCG
ATACATGCGC ATTGGTCGAC GACTTCCAGC GTTGCTACGG TGGTTATGCC AACAGGGACT
GGGAAGACCG AAACCATGTT GGCAACCTTG ATCACGGCGC GGTGCCCACG TCTGCTTGTT
CTGGTTCCAA CCGATGCGCT CCGGCGACAA ATTGCCGAAA AATTCTATAG TCTTGGAATT
CTTAAAGATC CAGATTGTAT AGTCCTAGAT CAATCGGCGG TCAGGCCTGT GGTAGGTACA
TTGATGAAGC TCCCGTCCAC TCCAGACGAG GTCGATGAAT TCTTCAGCCA ATGTAACGTC
GTCGTAACCA CTAGCGCATT GGCCGGACTT TGCTCCCCTG ATGTTCAGGA CCGCATGGCG
GAGCAATGTT CACATCTCTT CATTGACGAG GCGCATCACG CAGAGGCACC CACGTGGAAG
CGGTTCAAAT CTTTTTTTAA AGTGCGTGAA AGGCCCATCT TACAGTTCAC AGCGACTCCA
TTCCGGGAGG ATGGCCAGCC ACTCGACGGG AAGATCGTCT ATGTGTATCC CCTCAGAATG
GCCCAACGTG AGGGATACTT TCGTTCTATT CGTTTCAGAA ATGTCTTCGA ATTCAGCACG
CCGCGAGCTG ATATGGAAAT CGCCAAAGCG GTCGTAGATG AATTGCGAAA AGACGTAACG
GGACTTCACG TCGCCATGGC GCGTGTAGCT ACCAAAGCTC GCGCCGCTCA CGTGCTTGAA
ATCTACCGCA ATATCGGACA ATACAATCCA GTCATGCTCC ACAGCACCAT GTCCAAGAAG
GACGCGAATG TCTCTCGGAG CTTACTCGAC TGCGGCCGGT CACGGATTGT AGTCTGTGTG
GACATGCTAG GCGAAGGCTT TGACATGCCC GAACTGAAGA TTGCTGCATT TCATGACCTC
AAGAAGAGCT TGGCGATCAC CTTGCAGTTA GCTGGCCGCT TCACGCGAGC GAGAAAAGAT
CTAGGCGACC CTGTATTCAT CGCAAACACG GCAGATGTGA ATCTCCGTGA AGAGCTGCGA
ACACTCTATT CCCAAGATCC TGACTGGAAT CTTCTCCTGC CAGGCCTGAG CGAAGGCGCG
ATCGGTCAAG AAGTTGAGGC GCAGGAATTC CTCGCTGGAT TTGTCGGACG GCTCGACGAT
ATTCCATTGC ATGAAATTCA TCCATCAGCA AGCATGGTCG TATATCGCAC CCGATGTGCG
ATGTGGAAAC CTGAGAACTT CCGAAAGGCA TTTCGAGGGG GATCGAAGGA CGAGCGGATT
TATCCAATTC TTAACGTGTC CGAACATACC TTGGTAGTCT TAGCGCCGCG ACGCCACGGT
GTGCCGTGGA CCGATATCGC GTCGGTTGAG AGCATTGTCT GGGAACTCTG TATCGCTGTA
TGGGATCAAC CTCGCGCTCT CCTTTATATC CACGGATCGA CGAACACTGG TACCTACTCA
GACTTTGCAA AAGCGCTGTG CGGAGATGAT GCCTCCTTGG TAGTAGCACC CGAAGTGTTC
AGGGTGATGG CCGGAATCAA TCGGCTAATG CTCACGAATG TCGGCCTCAA CGAACAAATT
GGCCGCCAGA TTCGATACAC CGGCCGCATG GGCCCCGACG TAGGAGCACG TCTATCTGAA
GCAACGCTGG GCACCACAAC GAAGGCTGTT TTAGCAGCGG TCGGATTTTC ACGGGGGGAA
CAAACTTCCA TCGGTGCAGG GAAGCGAGGA CGTGTGTGGT CGAATCTACG CCTGCGCGTA
GGCCAATTTT CAGAGTGGTG TAAGCAAGCC GGCGAGAAGA TCGCGAACGA GGAGATCGAT
CCAGAAGAGG TTCTGAAAGG CACTTTGATT CCGCGCATGG TGATGGCGCG CCCATCTTCT
GTTGCCGTTG GGGTCGACTG GCCGGTTGAA CTCATTGACT TCAACGAATC CGTCACAGCA
TTCTCTTTTG AGTATGTATC AGAAGTTTCC ATGACTCACG TCGGCATCGA GCTTGTTGAG
TGCTCGGCAA CCGCGCCGCT GATCATCCGC ATATTCACCG ACAACCGGGA GGTCAAAGTC
CGCCTGAAGT TCTTGGGAGC TGGTGCCACG GCTGACTTCG CCTTTGTCTA TGAAGGCTCG
GATCGTGCCC AGATCCGACG CGGGAAAACA GTCGACCTTT GTGATTTTCT CACCGAGTTT
CCTCCGACTA TTTGGTTTGC GGATGGTTCG AGGCTAGACG GAAACATGCA TACGGAGTTG
CGTACCGGCT CAACGCTGTT TCCACGGGAC AAGCTCGAAG TACTCGATTG GACAGACATT
GATATAAAAA AAGAATCGCA ACGTGAGGAG CGCAGGAAAG ACTCGGTGCA ATACAGAACT
ATCGAGGTTC TAAAAGAGCG GTACGCTTAT GACGTGCTGT TCGATGATGA CGGAGCGGGT
GAAGCAGCGG ATATTGTGGG AATAACTCTC GATGATCCCG TGGCGCCGAA GCTGATTACG
GTTGACCTGG TGCATTGCAA ATACTCAGGC GGGAGCACGG CGGGTACGCG AATTGACGAT
ATGTACGTCG TGTGCGGGCA GGCACAGCGC AGCGTTATGT GGTTGCACAA CAAGGACAGA
CGGACCGATC TCTTCGTTCA CCTTCTAAAG CGCGAAGCTA CACGCATCGA TGAAGGCAGA
CCATCCCGTA TAGAGGTCGG TAGCCGTGAT CGGCTGGCGT TGATCAGGGA CATCAGCCGT
ACATGTTCAG TGACCCTCCG AGTTTTCATC GTCCAACCGG GGCTTTCGAG GACAAAGGCT
GCTGAGCATC AACTGGCACT GCTAGGGGTC ACTGAGAAAT TTTTGAACGA AACTTACCAA
CTTCCGTTGC ATGTCTTTTG CGGCGATATT GTGAAGGATT GA
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| Protein sequence | MKLTLPPLLG IDIKFAKGSV RQLTEASRTL EAQMMRFALP SALGWKFETA LGEIIYLFQR
VPVEAEMPSD GAVLVGHVPE AAEEIDLRNA KWIPRKGSMA GNPVAEALNS WRNAFKYISE
DEAGFGRIGL RKPQIGALHA IHAHWSTTSS VATVVMPTGT GKTETMLATL ITARCPRLLV
LVPTDALRRQ IAEKFYSLGI LKDPDCIVLD QSAVRPVVGT LMKLPSTPDE VDEFFSQCNV
VVTTSALAGL CSPDVQDRMA EQCSHLFIDE AHHAEAPTWK RFKSFFKVRE RPILQFTATP
FREDGQPLDG KIVYVYPLRM AQREGYFRSI RFRNVFEFST PRADMEIAKA VVDELRKDVT
GLHVAMARVA TKARAAHVLE IYRNIGQYNP VMLHSTMSKK DANVSRSLLD CGRSRIVVCV
DMLGEGFDMP ELKIAAFHDL KKSLAITLQL AGRFTRARKD LGDPVFIANT ADVNLREELR
TLYSQDPDWN LLLPGLSEGA IGQEVEAQEF LAGFVGRLDD IPLHEIHPSA SMVVYRTRCA
MWKPENFRKA FRGGSKDERI YPILNVSEHT LVVLAPRRHG VPWTDIASVE SIVWELCIAV
WDQPRALLYI HGSTNTGTYS DFAKALCGDD ASLVVAPEVF RVMAGINRLM LTNVGLNEQI
GRQIRYTGRM GPDVGARLSE ATLGTTTKAV LAAVGFSRGE QTSIGAGKRG RVWSNLRLRV
GQFSEWCKQA GEKIANEEID PEEVLKGTLI PRMVMARPSS VAVGVDWPVE LIDFNESVTA
FSFEYVSEVS MTHVGIELVE CSATAPLIIR IFTDNREVKV RLKFLGAGAT ADFAFVYEGS
DRAQIRRGKT VDLCDFLTEF PPTIWFADGS RLDGNMHTEL RTGSTLFPRD KLEVLDWTDI
DIKKESQREE RRKDSVQYRT IEVLKERYAY DVLFDDDGAG EAADIVGITL DDPVAPKLIT
VDLVHCKYSG GSTAGTRIDD MYVVCGQAQR SVMWLHNKDR RTDLFVHLLK REATRIDEGR
PSRIEVGSRD RLALIRDISR TCSVTLRVFI VQPGLSRTKA AEHQLALLGV TEKFLNETYQ
LPLHVFCGDI VKD
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