Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3929 |
Symbol | |
ID | 4312825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 818074 |
End bp | 819858 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151771 |
Product | nitrite/sulfite reductase hemoprotein beta subunit |
Protein accession | YP_775817 |
Protein GI | 115358679 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.17068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCGAT ATACCGATTT CGACCGGGCG CTCGTGCACA GCCGCGCCGC CCAGTTCCGC GACCAGCTCG AGCGCTGGCA GCACGGCACG CTGAGCGAGG ACGCGTTCCG GCCGTTGCGC CTGCAGAACG GCTGGTACGT GCAGCGCCAT GCGCCGATGC TGCGCGTCGC CGTGCCGTAC GGCGAACTGT CGAGCGCGCA GCTTCGCGTG CTCGCGCGGA TCGCACGCGA CTACGACGTG CCCGACGACG CCACCTATCG CGCCGCCTGC GACGCGCAGG CGTTGCTCGG CACGCTGCGC CTGCCGACCG GCAATGCGCA CTTCACGACC CGCACCAACG TGCAGTTCAA CTGGATTCCG CTCGCGAAGG CGGCCGACGT GATGGACCTG CTCGCGACCG TCGACATGCA CGGGATCCAG ACGAGCGGCA ATTGCATCCG CAACATTTCC TGCGACGAAC GCGCGGGCGT CGCGCCGGAC GAGATCGCCG ATCCGCGTCC GTTCGCCGAG GCGATGCGCC AGTGGACGAC GCTGCATCCG GAATTCGCGT TCCTGCCGCG CAAGTTCAAG ATCGCGATCA CCGGCGCGGC CGAGGATCGT GCGGCGACTG ACTGGCACGA CGTCGGGCTG AAGCTCGTGC GCAACGACGC CGGCGAACTC GGCTTTCGCG TGAGCGTCGG CGGCGGCATG GGCCGCACGC CGCTGATCGC GACGCTGCTG CGCGCGTTCC TGCCGTGGCA GCACGTGATG AACTACATCG AGGCGATCGT CCGCGTGTAC AACCGCTACG GGCGGCGCGA CAACAAGTAC AAGGCGCGCA TCAAGATCCT CGTGAAGAGC GAGGGGCAGC GCTATATCGA CGACGTCGAG GAAGAGTTCC GCCAGATCGT CGAGCACGAC GGCGGCCCGC ACACGATCCC GCAGGCCGAG TTCGACCGCA TCGCGGCATC GTTCGTCCCG CCACGGCTGA CGTCGCGCAC GCTCGACCTC GACGCCGCCG AAGCGCGCAT GACCGCGCAC GCCAATCGCC ATCCGGCGTT CGCGCGCTGG CTCGCGCGCA ATGTCGCCGC GCACCGCGAC CGCGCGCTGC GCATCGTCAC GCTGTCGTTC AAGCGCCGCC TGCAGGCGCC CGGCGACGCG TCACCCGAGC AGCTCGACGC GCTCGCGGAG CTCGCCGATC GCTTCTCGGC CGGCGAGGCG CGCGTCACGC ACGCGCAGAA CATGGTGCTG CCGTGGGTGC ACGTCGACGA TCTGTTCCTG CTGTGGGAAC ACGCACGTGC GATCGGCCTG GCCAGCGCGA ACGTCGGACT CCTGACCGAC ATGATCGCGT GCCCGGGCGG CGATTTCTGC GCGCTCGCGA ACGCGCGCTC GATCCCGATC GCCGACGCGA TCGCCGAACG GTTCCGGGAT CTCGACATGC TGCACGACGT CGGCGACATC GACCTGCACA TCAGCGGCTG CATCAACTCG TGCGGCCACC ATCACAGCGG ACACATCGGC ATCCTCGGCG TCGACAAGGA CGGCGCGGAG TGGTACCAGG TGACGCTCGG CGGCTCGGAT GGTTCGAGCG CGAGCGGCCC CGCCCGGCCG GGCAAGGTGA TCGGACCGTC GTTCTCTGCG GACGAGATCG TCGATGTCGT GGATGCGCTC GTCAACGTGT ATCTCGACGC GCGGCTCGAC GCCGACGGGC GCTGCGAGCG CTTCATCGAC ACGGTGCGCC GCATCGGCGC CGAACCCTTC AAGGCCGCGG CGAACGACGC ACGTCACCAC GCGGAGCACG CATGA
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Protein sequence | MYRYTDFDRA LVHSRAAQFR DQLERWQHGT LSEDAFRPLR LQNGWYVQRH APMLRVAVPY GELSSAQLRV LARIARDYDV PDDATYRAAC DAQALLGTLR LPTGNAHFTT RTNVQFNWIP LAKAADVMDL LATVDMHGIQ TSGNCIRNIS CDERAGVAPD EIADPRPFAE AMRQWTTLHP EFAFLPRKFK IAITGAAEDR AATDWHDVGL KLVRNDAGEL GFRVSVGGGM GRTPLIATLL RAFLPWQHVM NYIEAIVRVY NRYGRRDNKY KARIKILVKS EGQRYIDDVE EEFRQIVEHD GGPHTIPQAE FDRIAASFVP PRLTSRTLDL DAAEARMTAH ANRHPAFARW LARNVAAHRD RALRIVTLSF KRRLQAPGDA SPEQLDALAE LADRFSAGEA RVTHAQNMVL PWVHVDDLFL LWEHARAIGL ASANVGLLTD MIACPGGDFC ALANARSIPI ADAIAERFRD LDMLHDVGDI DLHISGCINS CGHHHSGHIG ILGVDKDGAE WYQVTLGGSD GSSASGPARP GKVIGPSFSA DEIVDVVDAL VNVYLDARLD ADGRCERFID TVRRIGAEPF KAAANDARHH AEHA
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