| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3861 |
|---|
| Symbol | |
|---|
| ID | 4312757 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 748810 |
|---|
| End bp | 749859 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638151703 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_775749 |
|---|
| Protein GI | 115358611 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.657196 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTATT CGCTTTCATT GCTGGATAAA AGCCCGATCG CCGACGGCAC GACCGCCGCC
GACGCGCTGC GCTTCACGAC GACCCTCGCG CAACGCGCGG AACAGCTCGG CTACGAGCGC
TTCTGGGTGG CCGAGCATCA CGGCGCGCCG GGCTTTGCGA GTTCCGCGCC CGAGATCGTG
GTCGCGCACC TGCTCGCGCA CACGTCGCGC ATTCGCGTCG GCTCGGGCGG CGTGATGCTG
CAGCACTACA GCCCGTTCAA GGTCGCCGAG TCGTTCAGGC TGCTCGCCGC GCTCGGGCCG
GGCCGCGTCG ATCTCGGCAT CGGCAAGGCG CCCGGCGGGC TGCCGCTCAC CACGCGCGCG
CTGCAGTGGT TTCACGACAA GGCGAACAAG CCCGACTTCG CGGGCCAGCT CGCGGCGCTC
GACGCGTTCC TCGGCTGGGG TGTCGCCGAA GATCATCCGC TCGCCGGTGC GGTCGCGCTG
CCGGTGCCGC CACACGCGCC CGAGCGCATC CTGCTCGGCG GCTCGCCCGA CAGCGGCGCG
CTCGCCGCGC GCCACGGCTG GCGCTTCTGC TACGCGGGGC ACTTCAACGG CGACGACGCG
AACCTCGAGC GCTCGCTCAC CGCGTATCGC GACGCGGGCG GCACGCGCGC GCTCGTCGCG
CTGTACGCGG TCGCCGCGCC GACCCGCGAC GAGGCCGAGC AGCTGATCGG GCCGCTGAAG
ATCTTCCGGC TGCAGTTCGC CGGCGGTCAG AGCTTCAACC TGGCGAGCGC GCAGGCCGCG
GCGGAATTCG CGCGGCAAAG CGGCGCGTCC GACTACCGGA TCGACGAGCT GCGCCCGACC
GTGCTGGCCG ATACGCCCGA GCGCGTGCAT CGCGCGCTCG ATGCGCTGAG CCGGCGGCTC
GACGTCGACG CGTTCGTGAT CGACTCGCCG GTGACCGATT ACGCGGCGCG CCTCGCGTCA
GCCGAATGGC TCGGCGGCGC GCAGTCGATC ACGCCCGTGC AGGCGGCCCT TTCGGCCGAA
CGTTCCCTTT ACCCCGACCA GAACGCGTGA
|
|---|
| Protein sequence | MSYSLSLLDK SPIADGTTAA DALRFTTTLA QRAEQLGYER FWVAEHHGAP GFASSAPEIV
VAHLLAHTSR IRVGSGGVML QHYSPFKVAE SFRLLAALGP GRVDLGIGKA PGGLPLTTRA
LQWFHDKANK PDFAGQLAAL DAFLGWGVAE DHPLAGAVAL PVPPHAPERI LLGGSPDSGA
LAARHGWRFC YAGHFNGDDA NLERSLTAYR DAGGTRALVA LYAVAAPTRD EAEQLIGPLK
IFRLQFAGGQ SFNLASAQAA AEFARQSGAS DYRIDELRPT VLADTPERVH RALDALSRRL
DVDAFVIDSP VTDYAARLAS AEWLGGAQSI TPVQAALSAE RSLYPDQNA
|
|---|
| |