| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3841 |
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| Symbol | |
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| ID | 4312737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 713382 |
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| End bp | 714131 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638151683 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_775729 |
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| Protein GI | 115358591 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.650053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC TTGCAGGAAA GGTTGCAGTC GTCACCGGCG CAAACAGCGG TATCGGATTT
GCCATCGCCT CACGTTTCAC CGAAGAGGGG GCCAGTGTCG TTATCGTCGG GCGCCGAGCC
AGCGCCGTGG AGGAAGCGGT TGCACGACTC GGTGAGAATG CCACAGGTGT TACCGGCGAC
CTCTCCGACC TCACGACACA CGAACGTGTT GCGTCACTCG TTGCCGAGCG CTTCGGCAAG
GCCGATATCT ACGTAGCGAA TGCCGGTATG AACGTGATCA CGCCATCTGA TCAAGTCTCG
GTTGAAGAAT ATGACAGACA GTTTGCAACC AATACCAGGG CAGCCTTTTT TGGTGTGCAG
AAGATCGCAC CACTACTGAA CAACAACGGC TCAATTGTGC TGATCAGCTC GATCGCGAGC
AGCAAGGTGC TGGACGGGCA TGCCGTCTAT GCCGGAAGCA AAGCGGCGCT CGAAGCTTTC
GCCCGTAACT GGGCTCTGGA GTTCAAGGAA CGTCGCATCC GCGTGAACGT CATCAGTCCG
GGTCCGACGG ACACCCCGAT CCTCGGCAAG CTTGGCATTA CGGCAACGGA TCGCCCTGCT
TTCGAAGCCG TCATGGCGGG CGCTATTCCG TTTGGCCGAC TCGGGCGCGC AGAAGAAATT
GCCAATGCCG CGCTGTTCCT TGCAGGAGAC GAAGGCAGTT TCATTACCGG CGTCAACCTG
CGAGTTGACG GGGGAATTTC ACTCGTCTGA
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| Protein sequence | MNTLAGKVAV VTGANSGIGF AIASRFTEEG ASVVIVGRRA SAVEEAVARL GENATGVTGD
LSDLTTHERV ASLVAERFGK ADIYVANAGM NVITPSDQVS VEEYDRQFAT NTRAAFFGVQ
KIAPLLNNNG SIVLISSIAS SKVLDGHAVY AGSKAALEAF ARNWALEFKE RRIRVNVISP
GPTDTPILGK LGITATDRPA FEAVMAGAIP FGRLGRAEEI ANAALFLAGD EGSFITGVNL
RVDGGISLV
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