| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3653 |
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| Symbol | |
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| ID | 4312549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 500287 |
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| End bp | 500976 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638151495 |
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| Product | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit |
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| Protein accession | YP_775541 |
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| Protein GI | 115358403 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | [TIGR02305] 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.184465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.480508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTGT CTTGCAGGAC CGCCGCGGCG CCGCCGCTGC CGGTCGCCAT CGGTACCGTC
TACGGCGCGC TGCTCAACGA GCGCGCGGCA TTCGACGCGC TCGGCGACGC CGTGCACGCG
CCGCCCTACC GCCGCCCGCC CCAGGCGCCG ATCCTATATA TCAAGCCGGC CAACACGCAC
GCAGCGGACG GCGCGGCCGT CGTGGTGCCG GCCGGCGTCG ATGCGCTGGA GATCGGCGCG
TCGGTGGCCG TCGTGTTCTC GCGGCGCGCG ACGCGCGTGC CGGCCGCGCA GGCGCTCGAC
TACGTGCACG GTTTCACGCT TGCGAGCGAC GTGTCGGTGC CGCATCCCGA TTACTACCGT
CCCGCCGTGC GCTTCAAGTG CCGCGACGGC TTTTGCCCGC TGGGTCCCGT GATCGTGCCG
GCGGCGGCGC TTGCCGACGT CGACGCGATT GGCCTGACCG TGCGGATCGA CGGCGCCACC
GCGGTGTCCG CTTCGACGGC CACGCTGATT CGCCCGGTGC GCGAACTGAT CGCCGACGTG
ACGGCCTTCA TGTCGTTCGA CGCGGGCGAC GTGCTGCTGC TCGGGGTCAC GGGCGGCGCA
CCGCGCGCCC GCGCGGGTAG CACGATCGAG ATTACGGCCG CCGGCATCGG CACGTTGCGG
CATACGCTGA TTGCGGAGGA CGCACGATGA
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| Protein sequence | MELSCRTAAA PPLPVAIGTV YGALLNERAA FDALGDAVHA PPYRRPPQAP ILYIKPANTH
AADGAAVVVP AGVDALEIGA SVAVVFSRRA TRVPAAQALD YVHGFTLASD VSVPHPDYYR
PAVRFKCRDG FCPLGPVIVP AAALADVDAI GLTVRIDGAT AVSASTATLI RPVRELIADV
TAFMSFDAGD VLLLGVTGGA PRARAGSTIE ITAAGIGTLR HTLIAEDAR
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