Gene Bamb_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3639 
Symbol 
ID4312535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp481269 
End bp482051 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID638151481 
ProductCRP/FNR family transcriptional regulator 
Protein accessionYP_775527 
Protein GI115358389 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCATC TTTACTCGAG CTACTCGGCG AATGCCATTC TCGGCGCTCT CCCCGAGGAC 
AGCATCCGTG CCATTGCACC GCATCTCGAG CTGGTCAGGA TCAAGGCCGG CATGCTCGAC
CGGGTCGGTG AGCCGATGCG CCACCTGCAT TTCCCGACCA CCGCCATGAT GTCCGTGCAG
CACCTGATGG AGGACGGGGC GATGGTCGAA GTCGCGATGG TCGGCCGCGA AGGCACGGTC
GGCCTCGCGA CGCTGCTCGG CGGCACCGCA GTGTCGAACC GCATCGAAGT CCGCATCGGC
GGGATGGCCT ATCGCGTGCC GACCTGCATC ATGCGCTCGG AATTCGAACG TTCGCCGGAC
ACGTACCGCC TGCTGCTGAA CTACTGTCAG GCGATCATGG CGCAGGTGTC GCGCAGCGCG
CTGTGCAACC GGCACCACTC GGTCAGCGAG CAATTGAGCC GCTGGCTGCT GCTCGCGCAC
GACCGGATCG ACGGCGACGA ACTGGCCGTC ACGCAGCAGA CGATCGCGAA CATGCTCGGC
GTGCGTCGCG AAGGCGTGAC GGAAGCGGCC GGCAATCTGC AGGAGGCCGG GCTGATCCGG
CAGCGGCGCG GCCGTATCAC CGTGCTCGAT CGCGACGGTC TCGAGCGTCA GGCATGCGAG
TGCTACGAGC TGATTCGTGC GGACTATCGC CGGCTGCTCG GCGCGCGAGC CGGCGCGCGT
TCGATGCCGG TGCGGCAGCG TATGCAGGAC ATGCACGGCG GATTCCCCGC GCACGGTGCG
TGA
 
Protein sequence
MLHLYSSYSA NAILGALPED SIRAIAPHLE LVRIKAGMLD RVGEPMRHLH FPTTAMMSVQ 
HLMEDGAMVE VAMVGREGTV GLATLLGGTA VSNRIEVRIG GMAYRVPTCI MRSEFERSPD
TYRLLLNYCQ AIMAQVSRSA LCNRHHSVSE QLSRWLLLAH DRIDGDELAV TQQTIANMLG
VRREGVTEAA GNLQEAGLIR QRRGRITVLD RDGLERQACE CYELIRADYR RLLGARAGAR
SMPVRQRMQD MHGGFPAHGA