| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3581 |
|---|
| Symbol | |
|---|
| ID | 4312477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 405072 |
|---|
| End bp | 405809 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638151423 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_775469 |
|---|
| Protein GI | 115358331 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.367106 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA CCGCCCAACT CATCGAAACG CTGAAGCGCC AGCTGAAGGC GCAGGGAATG
ACCTATCGCG ACGTCGCGCG CGCGCTCGAC GTGTCCGAGA CGAGCGTGAA GCGGCTGTTC
GCGAGCGGCC GCTTCACGCT GGAGCGCGTC GCGGAGATCG CGCAACTGCT CGGCTATACG
CTTGCCGAAC TCGTGCAGGA GGCATCGGCA TCCGCGCCGC GCTTGCGCGT GCTGACCGAG
CAACAGGAGG CGCTGCTCGT GTCGGACGAG AAGCTGCTGC TCGTCGCCGT TTGCGCGGTT
AACTACTGGA CCGTGCAGGA CATCGTGTCG GCCTATTGCC TGACGCAGGC CGAGTGCGTG
AAATACCTGC TGATGCTCGA CCGGATGAAC GTGATCGCGC TGCTGCCGGG CGACCGGATT
CGCGTGCGCG TCGCCCGCGA TTTCGACTGG CTGCCGGGCG GGCCGATCCG CCGTTATTTC
CATGCACACG TGCTCGACGA CTTTCTCGGC AGCCGTTTCG ACGGCCCGGG CGAGACGATG
ACGTTCTCGC AAGGGATGCT GACCGACGCG GCCGCCGCGG AACTCGAGCA GGAGCTGCGG
CGGCTCGGCG CCAAGGCGGC GGCGCTGCAC GCGGAGTCGT CGTCCGCGCC GCTCGGGCAG
AAGCGCGGCA CGGGCCTGCT GATCGCCAAG CGGATCTGGG AGCCGACCGG CTTCCACGCG
CTGCGGCGCC ATGCGTGA
|
|---|
| Protein sequence | MTETAQLIET LKRQLKAQGM TYRDVARALD VSETSVKRLF ASGRFTLERV AEIAQLLGYT
LAELVQEASA SAPRLRVLTE QQEALLVSDE KLLLVAVCAV NYWTVQDIVS AYCLTQAECV
KYLLMLDRMN VIALLPGDRI RVRVARDFDW LPGGPIRRYF HAHVLDDFLG SRFDGPGETM
TFSQGMLTDA AAAELEQELR RLGAKAAALH AESSSAPLGQ KRGTGLLIAK RIWEPTGFHA
LRRHA
|
|---|
| |