| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3506 |
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| Symbol | |
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| ID | 4312402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 315444 |
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| End bp | 316610 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151348 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_775394 |
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| Protein GI | 115358256 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG CCTTTCTTCC CGCCCGTCTT GCCTTCTCCG CGGCCGCGCT GATCGCGGCC
GTTCCCGCCT TCGCGCAATC CGCGCCGCAG ACGATCCTGA TCGGCCTCGC CGCACCGCTC
ACCGGCCCGT CCGCGCGCAT CGGCAAGGAT CTCCAGAACG GCGCGCAACT CGCGATCGAC
GACGCGAACG CGGAGCATCC GAGCATCGGC GGCAAGCCGG TCGTCTACAA GCTCGTCGCG
GCCGATGACC AATCCGACCC GCGCACGGCC GTCGCGGTCG CGCAGCAGCT GGTCGACCAG
CACGTGATCG GCGTCGTCGG TCACTGGAAC ACGGGCTGCA GCGTGCCGGC GTCGCGCGTC
TATCGCGATG CGGGCATTGC GCAGATCGCG CCGGCCTCCA CCGGCCACCA ATACACGCAG
CAGGGCTACG CAACCGCGTT CCGCATCATG GGTCACGACG ATGCGGGCGG CAATTTCACC
GGCGCCTATG CGGTGAAGAC CCTGAAGGCG AAGCGCATCG CGGTGATCGA CGATCGCACG
TCGTTCGGCG CGGGGCTGGC CGACCAGTTC ATCAAGGGCG TGCAGGCGAA TGGCGGCACG
ATCGTCGATC GCCAGTACGT GAACGACAAG ACGACCGACT TCAGCGGCGT GCTGACCGCG
ATCAAGGGCA AGCGCGCGGA TCTCGTGTTC TTCGGCGGCC TCGACGCGCA GGCCGCGCCG
ATCGCGCGCC GGATGCGCCA GCTCGGCGTG AACGCGCCGC TGCTCGGCGC CGGCGGTTTC
GTGAGCCAGA CCTTCCTGTC GCTCGCGGGC AAGGACGGCG AAGGCGTGAC GGCGCTGGAG
CCGGGCCTGC CGCTCGACCG GATGCCGGGC GGCAACGCGT TCGACGCGCA ATATCGCGCA
CGCTGGCACG CGCCGATCGA GCTGCACGCG CCGTTCGCGT ACGACGCGGC CGCCACGCTG
ATCGCGGCCG TCCAGAAGGC CGGCTCGACG CAGCCCGCGA AGGTGGTCGC GGCCGTGCGC
GCGATCGACC GGCCCGGCGT GACCGGCCGG GTCGCGTTCG ATCAGCAAGG CAACCTGAAG
GACCCGGCGT TCACGATCTA CCAGGTGCGC GGCGGCAAGT GGACCGTCGT CGACGTGCTC
GGCGGCGGGC GCCCCGCAAC GAAATAA
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| Protein sequence | MKIAFLPARL AFSAAALIAA VPAFAQSAPQ TILIGLAAPL TGPSARIGKD LQNGAQLAID
DANAEHPSIG GKPVVYKLVA ADDQSDPRTA VAVAQQLVDQ HVIGVVGHWN TGCSVPASRV
YRDAGIAQIA PASTGHQYTQ QGYATAFRIM GHDDAGGNFT GAYAVKTLKA KRIAVIDDRT
SFGAGLADQF IKGVQANGGT IVDRQYVNDK TTDFSGVLTA IKGKRADLVF FGGLDAQAAP
IARRMRQLGV NAPLLGAGGF VSQTFLSLAG KDGEGVTALE PGLPLDRMPG GNAFDAQYRA
RWHAPIELHA PFAYDAAATL IAAVQKAGST QPAKVVAAVR AIDRPGVTGR VAFDQQGNLK
DPAFTIYQVR GGKWTVVDVL GGGRPATK
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