Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3446 |
Symbol | |
ID | 4312181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 242450 |
End bp | 243250 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151288 |
Product | haloacid dehalogenase, type II |
Protein accession | YP_775334 |
Protein GI | 115358196 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II [TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.301788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCG AACCGGCGCC GCGCAATCCG GCGGCACGGA GATGCGCCCT CTCATCGATC GACCTTCACT GGATCACCAT GACGAACCCT GCCGACATCA AGGCGCTCGT TTTCGACGTG TTCGGAACGA TCGTCGACTG GAGAAGCGGC GTCGCGCGCG AAGCCGCGGC GTTCCTGGCG CGCCATGCGG CGGATCTCGA CCCGTTCGAA TTCGCCGACG CGTGGCGCGC CGAATATTCA CCGTCGATGG AGGAAATCCG CAGCGGCCGC CGCCGCTACG TGCGGCTCGA CGTGCTGCAT CGCGAGAACC TCGTGCGCAC CCTCGACCGC TACGGCATCG ACGGCGCGCC CGATGACGAG ATCGACGCGC TGAACCTCGC GTGGCACCGG CTCGATCCGT GGCCCGATTC GGTCGCGGCG CTGCAGCGGC TGAAGCAGCG CTACGTGATC GCGCCGCTGT CGAACGGCAA CATCCGGCTG ATGATCGACG TCGCGAAGCA CGGCGGCCTG CCGTGGGACG CGATTCTCGG CGCGGAAGTC GCGCACGCGT ACAAGCCGTC GCCGAAGGTC TATACCGATG CGGTCGAGAT CCTCGGCGTC GCGCCGGCCG AGGTGTGCCT GGTCGCCGCG CACAACGGCG ATCTCGCCGC CGCGCGGCAA CTGGGGCTGG CGACCGCGTT CGTGCTGCGG CCGGCCGAAC ACGGGCCGAA CCAGACGACC GACCTGCAAG CGGACGACGC GTGGGACTTC GACGTCAGGG ACCTGAACGA ACTCGCGGAC CGGCTCGGGT GCCCTGGTTG A
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Protein sequence | MSIEPAPRNP AARRCALSSI DLHWITMTNP ADIKALVFDV FGTIVDWRSG VAREAAAFLA RHAADLDPFE FADAWRAEYS PSMEEIRSGR RRYVRLDVLH RENLVRTLDR YGIDGAPDDE IDALNLAWHR LDPWPDSVAA LQRLKQRYVI APLSNGNIRL MIDVAKHGGL PWDAILGAEV AHAYKPSPKV YTDAVEILGV APAEVCLVAA HNGDLAAARQ LGLATAFVLR PAEHGPNQTT DLQADDAWDF DVRDLNELAD RLGCPG
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