Gene Bamb_3354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3354 
Symbol 
ID4312356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp147376 
End bp147870 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content66% 
IMG OID638151196 
Productcolicin V production protein 
Protein accessionYP_775243 
Protein GI115358105 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0663199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGG CTTTCGACTA CGCTGTATTG GCGGTAATCG CGTTGTCTGC GCTGCGTGGC 
GCATGGCGCG GTTTCGTCTC GGAGATTTTC GGGTTGATCG GCTGGATCGT GGCGGTCGTG
ATCGCCGCAC GCTATGTCGG GCTGGTGGTG CCGTATATTC CGGCGAACTG GCCGGGCGGC
GCGCTCACCC AGTGGGTGCT CGCGTTCGCG CTGATCGTGA TCGGCGTCGT GTTCGTCGCG
GGTGTCGCGA ACGCGCTGTT GTCGCGGATC GCGCAGGCGA CGGGCCTCGG TGGAGTCGAT
CGCTCGCTGG GCATGATGTT CGGGCTCGTC CGCGGCTGCG TGCTGGTGGT GCTGCTGGTC
GCGGCGGCCG GGCTGACCGA ATTGCCCAAA CAGGATTTCT GGCGCAATGC GCTCTTGCGT
CCTTTCGCCG AACAGGGCGT GCACGAGCTG AAGCAGCTCC TGCCCGACGG CATGGCCCAG
TACGTGCGCG TGTGA
 
Protein sequence
MLTAFDYAVL AVIALSALRG AWRGFVSEIF GLIGWIVAVV IAARYVGLVV PYIPANWPGG 
ALTQWVLAFA LIVIGVVFVA GVANALLSRI AQATGLGGVD RSLGMMFGLV RGCVLVVLLV
AAAGLTELPK QDFWRNALLR PFAEQGVHEL KQLLPDGMAQ YVRV