| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3276 |
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| Symbol | |
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| ID | 4312135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 64649 |
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| End bp | 65767 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638151118 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_775165 |
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| Protein GI | 115358027 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.996632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACGT CGCACCCCCC GTCACTGAAA GAAAATCGTC AGGGAACCGC ATCGCCACGC
AACGTCGGTT CGAGGCGGCG GCGCATCCTG ACCGCCGTCG CCGTGGTCGC GGCCATCGGC
GGCGCCGTGG CGCTGGGCCG CTGGTGGACG GTCGGCCGCT TCATCGAAAG CACCGACGAC
GCCTATCTGC AGGCCGACAA CATGACGGCC GCGCCGAAGG TCGCCGGTTA CGTGACCGAC
GTCTACGTGC GCGACAACCA GGTGGTCAAG GCCGGCGACC CGCTCGTGCG GCTCGACGTC
CGCCAGTACC AGGTGGCGCT CGCGCAGTCG ACCGCGACCG TCGACGCGCG CCGCGCCGAC
ATCGCGCGCG CGGAAGCCGA CATCAGCCAG CAGCGCGCGA ACCTCGAGCA GGCCGAAGCG
CAGGCGAAGG TATCGCAGAT CAACGCACGG CACTCGAGCG ACGAATACGC ACGCTACGCG
CCGCTCGCGG CGACCGGCGC CGAGACGCAC GAGCGCGTGG CCGACCTGAA GAGCACGCGC
GACCAGGCCG CCGCGACGCT CGCCGCGAAC ACTGCGTCGA TCGCCGCCGC CCGCACGCAG
ATCGCGTCGT TTACCGCGCA GCTGCAGCAG GCGCGCGCGC AGCTCGAAGC CGCGCAGGCC
AGCGCCGCGC AGGCACGGCT CGACCTCGAC AACACGATCG TGCGCAGCAC GCTCGACGGC
CGCGTCGGCG ACCGCACGGT GCGCGTCGGC CAGTACGTGC AGCCCGGCAC GCGCCTGCTG
ACCGTCGTGC CGGTGAACGC GATCTACCTC GTCGCGAACT TCAAGGAAAC GCAGATCGGC
CGGATGCGTA TCGGCCAGCC CGTCGAGCTG CACGTCGACG CGCTGCCGGA CGACACGCTC
AGCGGCACCG TCGACAGCTT CGCACCGGGC ACCGGCGCGC AATTCGCGCT GCTGCCGCCC
GAAAACGCGA CCGGCAACTT CACGAAGATC GTGCAGCGCG TGCCGGTGCG CATCCGCCTC
GCCGCGAACG CGCGCGCGCC ACGCATGCTG GTGCCGGGGC TGTCCGTGAC CGTCGACGTC
GACACCCGCC CGGACGGCAA CGAGAAACGC CATGGCTGA
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| Protein sequence | MSTSHPPSLK ENRQGTASPR NVGSRRRRIL TAVAVVAAIG GAVALGRWWT VGRFIESTDD
AYLQADNMTA APKVAGYVTD VYVRDNQVVK AGDPLVRLDV RQYQVALAQS TATVDARRAD
IARAEADISQ QRANLEQAEA QAKVSQINAR HSSDEYARYA PLAATGAETH ERVADLKSTR
DQAAATLAAN TASIAAARTQ IASFTAQLQQ ARAQLEAAQA SAAQARLDLD NTIVRSTLDG
RVGDRTVRVG QYVQPGTRLL TVVPVNAIYL VANFKETQIG RMRIGQPVEL HVDALPDDTL
SGTVDSFAPG TGAQFALLPP ENATGNFTKI VQRVPVRIRL AANARAPRML VPGLSVTVDV
DTRPDGNEKR HG
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