| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3190 |
|---|
| Symbol | |
|---|
| ID | 4310466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 3527132 |
|---|
| End bp | 3528181 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638151032 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_775080 |
|---|
| Protein GI | 115353241 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0127935 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGTC GAACATGGAA TCATGTGAGC GAGACGCGAC CATTCAGAGG CCATGGTCAC
GCCGATATCG GTGCGCACGT CGAGTCGCAC CCTCCACCCG ATCGCATCCG GATGCATCAC
ACGACGCACG AAGCGAAGCC GGTCATGCTG CGTAAGGACG CACTCGTCGC GTTCGCGCTC
GGCATTGCGC TGCTCGTGGC CGCGGCCGCG CTCGCCGTCA CCGCGGGCGG TGCGGCCGGC
CATCTGGTCC GCGCGCCGGG CACGGTCGTG CGCATCGTGC AGGACAGCGA CGCGATGCGT
GCATATCGCC CGATCGTCGC CTATCTCGCG AACGACGGCC GGCGCCGCGA AGTCGCCGGC
AATACCGCGT CGATGGTGCC GGCTTACGAC ATCGGCGAAA GCGTCGACGT CCTGGTCGAC
CCCGACCATC CGAACCGTCC CGCGCTGATC GACGATTTCG CGCAACGCTG GTTTCCCGTC
GCGGTGCCCG CCCTGCTCGC GCTCGCGTCG CTTGCGATCG GCAGCCTGTT GTACGTGAAC
GAGCGCCGCA GCCGGCAAGC CGACGCGTTT TCCGCACCGG CCGACCGCAA GACGATCCGG
CGCCGCTGGA ACATCGCGAT CGTGCTGATC CCGATCGCGA TCGGCACCGG TTTCCTGGCC
GGCGCCGGCG CTGTCGGGCT GCGCCAGTGG CAGATCGACC GCCATTACGC GCGCTCGACC
GGCCATGTCG TCGAGATCGC CGAAACGGCC CACTCGCCGC CCGCCCGCAC GTCGCTCTAC
TCGGTGAGCA TCGCGTTCAA GACCGACAGC GGCCGCCAGG TCACGTTCGC GCAAGGCTCG
GCGTCATCGA ATCCCGGGCT GTACGAAGGC GAGATCGTCG ACGTGCTGTA CGACCCCGTC
ACGCCCGAGC GCGCGCTCGT CGACCGGTTC TGGGACCGGT GGGCGCTCAC GGCGATCCTG
TTCGCGATCG GCGCGCCGTT CCTGGTGGCA GGGTTGTTCA TTGCCGGCAC CCTATGGCCC
GATCATCGGC CGCACGAAAT CCCCGAATGA
|
|---|
| Protein sequence | MGRRTWNHVS ETRPFRGHGH ADIGAHVESH PPPDRIRMHH TTHEAKPVML RKDALVAFAL
GIALLVAAAA LAVTAGGAAG HLVRAPGTVV RIVQDSDAMR AYRPIVAYLA NDGRRREVAG
NTASMVPAYD IGESVDVLVD PDHPNRPALI DDFAQRWFPV AVPALLALAS LAIGSLLYVN
ERRSRQADAF SAPADRKTIR RRWNIAIVLI PIAIGTGFLA GAGAVGLRQW QIDRHYARST
GHVVEIAETA HSPPARTSLY SVSIAFKTDS GRQVTFAQGS ASSNPGLYEG EIVDVLYDPV
TPERALVDRF WDRWALTAIL FAIGAPFLVA GLFIAGTLWP DHRPHEIPE
|
|---|
| |