Gene Bamb_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3161 
Symbol 
ID4310643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3494203 
End bp3495042 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content65% 
IMG OID638151001 
Producthypothetical protein 
Protein accessionYP_775051 
Protein GI115353212 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.499425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAAC AACCGTCGCT CGACGATTTC CGCGTGCCGT ACAGCACGCG TGACAAGGAA 
GTTGCCGCAT TCAGGCTCGA TGCGTTCGAT CCGGCCGCGA AGCCGTTCTC GTCGGGCTCG
AAGGATGCCG ACCGCGAACG GCTCAGCGCC GTGTCGACGG AGCTCGACGT GCAGCAGGAG
CGCCTGCACA CGCAGCAGAA GAAGCGCGTG CTGCTCGTGC TGCAGGGGAT GGACACCAGT
GGCAAGGACG GCACCGTGCG CGCGGTGTTT CGCGACGTCG ATCCGCTCGG CCTGCGCATC
GTGCCGTTCA AGGCACCGAC GCCGATCGAG GCCGCGCACG ACTTCCTGTG GCGCGTGCAC
GCGCAGGCGC CGGCCGCGGG CGAACTCGCG ATCTTCAACC GCAGCCACTA CGAGGACGTC
CTCGTGCCGC GCGTGCTGGA GCTCATCAGC GACAAGGAAT GCGAGCGCCG CTACCGGCAG
ATCCGCGATT TCGAGACGAT GCTCGCGGAG AACGGCACGA CGATCGTCAA GTGCTTCCTG
CACATCTCGA AGGACGAGCA GCGCGAGCGG TTGCAGGCGC GCATTGACGA TCCGACGAAG
CACTGGAAGT TCGACATCGC CGATCTCGAC GCGCGCAAGC ACTGGGATGC ATACCAGTCG
GCGTACCGCG ATGCGCTCGC CGCAACCTCG GCCGAGCATG CGCCGTGGTA CGTGATCCCG
GCGAACTCGA AAACCCATCG CAACGTGATG ATCGCCGAGC TGCTGCTGCG CACGATGACC
GACATGAAGC TCGAATTCCC GCCGCCGAAG CCGGAGCTCG AAGGCGTGAA GATCCGCTAG
 
Protein sequence
MAKQPSLDDF RVPYSTRDKE VAAFRLDAFD PAAKPFSSGS KDADRERLSA VSTELDVQQE 
RLHTQQKKRV LLVLQGMDTS GKDGTVRAVF RDVDPLGLRI VPFKAPTPIE AAHDFLWRVH
AQAPAAGELA IFNRSHYEDV LVPRVLELIS DKECERRYRQ IRDFETMLAE NGTTIVKCFL
HISKDEQRER LQARIDDPTK HWKFDIADLD ARKHWDAYQS AYRDALAATS AEHAPWYVIP
ANSKTHRNVM IAELLLRTMT DMKLEFPPPK PELEGVKIR