| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3088 |
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| Symbol | |
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| ID | 4310780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3408515 |
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| End bp | 3409432 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150928 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_774978 |
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| Protein GI | 115353139 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATC TGCAAAACAC CCTGCCGAGC GAATCCGCGC CGGCCGGCGG CCGTGCGCTC
GCGCTGCGCG AGTTCTGGGC CAACTTCTCG CGCAACCGCG GCGCCGTCGG CGCCGGCATC
GTCGTGCTGG TGTTGATCCT GGTCGCGCTG CTCGCCCCGC TGATCGCGCC GCACAGCCCG
GTCGAGCAAT ACCGCGACTA CGTGAAGATC CCGCCCGCGT GGCTCGAAGG CGGCAACTGG
CGCTTCATCC TCGGCACCGA CGAAGCGGGC CGCGACATTC TTTCGCGCCT GATGTTCGGC
GCGCGGATGT CGTTCTGGAT CGGCTTCGTG TCGGTCGTGC TCGCGCTGAT CCCCGGCATC
GTGCTCGGGC TGGTCGCCGC GTTCTTCCAG AAGTGGGCCG ACACGCCCGT GATGCGCATC
ATGGACGTGC TGCTCGCGCT GCCGTCGCTG CTGCTCGCGG TCGCGGTCGT CGCGATCATC
GGCCCGGGCC TCACCAACAC GATGTTCGCG ATCGCAATCG TCGCGCTGCC GGCCTATGTG
CGTCTCACGC GCGCGTCGGC GCTCGGCGAA CTGCAGAAGG AGTACGTGAC GGCGTCGCGC
GTGGCCGGTG CCGGCACGGT GCGCCTGATG TTCTCGCAGG TGCTGCCGAA CTGCACGGCG
CCGCTGATCG TGCAGGCGAC GCTCGGTTTC TCGTCGGCGA TTCTCGATGC GGCCGCGCTC
GGCTTCCTCG GCCTCGGCGT GCAGCCGCCG ACCGCCGAGT GGGGCGCGAT GCTCGCGTCC
GCGCGCGACT ACATCGACAA CGCATGGTGG ATCGTGACGA TGCCCGGCCT GTCGATCCTG
ATTTCGGTGC TCGCGATCAA CCTGCTCGGC GACGGGCTGC GCGACGCGCT CGATCCCAAA
CTGAAGCGGA TGGCCTGA
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| Protein sequence | MSNLQNTLPS ESAPAGGRAL ALREFWANFS RNRGAVGAGI VVLVLILVAL LAPLIAPHSP
VEQYRDYVKI PPAWLEGGNW RFILGTDEAG RDILSRLMFG ARMSFWIGFV SVVLALIPGI
VLGLVAAFFQ KWADTPVMRI MDVLLALPSL LLAVAVVAII GPGLTNTMFA IAIVALPAYV
RLTRASALGE LQKEYVTASR VAGAGTVRLM FSQVLPNCTA PLIVQATLGF SSAILDAAAL
GFLGLGVQPP TAEWGAMLAS ARDYIDNAWW IVTMPGLSIL ISVLAINLLG DGLRDALDPK
LKRMA
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