| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3067 |
|---|
| Symbol | flgE |
|---|
| ID | 4310549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 3386949 |
|---|
| End bp | 3388190 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638150907 |
|---|
| Product | flagellar hook protein FlgE |
|---|
| Protein accession | YP_774957 |
|---|
| Protein GI | 115353118 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1749] Flagellar hook protein FlgE |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTATC AACAGGGTCT GAGCGGCCTC GCCGGCGCAT CGAACGCGCT CGACGTGATC
GGCAACAACA TCGCCAACGC GAACACGGTC GGCTTCAAGT CGAGCACCGC GCAGTTCTCC
GACATGTACG CGAACTCGAT CGCGACGTCG GTCAACACGC AGATCGGCAT CGGCACGGCG
CTCTCGTCGG TGCAGCAGCA GTTCGGCCAG GGCACGATCA ACACGACGAA CTCGTCGCTC
GACGTCGCGA TCAACGGCAA CGGCTTCTTC CAGATGTCGA ACAACGGCGT GACGACGTAC
TCGCGCGACG GCACGTTCCA GCGCGACAAG AACGGCTACA TCGTCAACGC GCAGGGCCTG
AACCTGATGG GCTACCTGGC CGACAAGAAC GGCGTGGTGA ACACCGCGCA GACCGTGCCG
CTGCAGGCGC CGACGACCAA CATCTCGCCG ACCGCCACGA CCAAGATCAC CGGCCAGTTC
AACCTGAACT CGCAGGACAA GGTCCCGACC AAGACGCCGT TCGACGCGAC CGACACCTCG
ACGTACAACT ATTCGACGTC GGTGCAGGTG TACGACTCGC TCGGCGGCTC GCAGGCGGTC
AACATGTACT TCGTGAAGTC GGCGGCGGGC ACCTGGGAAG CGTATGCGGG CGTGCAGGGC
GGCGCCACGA CCGACCTCGG CACCGTCACG TTCGATTCGT CGGGCGCGAT CAAGAGCACG
ACGACGGGCA CGCCGGCCGT GCCGACCACG TCGGTCGGCC AGTTCCAGTT CACGGTGCCG
ACCACCGACG GCTCGACCAC GCCGCAGCCG CTCACGCTCG ACCTGACCGG CACCACGCAA
TTCGGCGGCA AGGACGGCGT GAACAACCTC GCGCAGGACG GCTACGCGAG CGGCACGCTG
ACGACCTTCT CGATCGGCGC GGACGGCAAG CTGACCGGCA ACTACTCGAA CGGCCAGACG
GCGGTGCTCG GGCAGATCGC GATCGCGAAC TTCAACAACC CGAACGGCCT CGTGAACCTC
GGCGGCAACC AGTACGCGGA AACGGCCGCA TCGGGCGTGC CGCAGATCTC GGCGCCGGGC
AGCACCAACC ACGGCACGCT GCAGGGCAGC GCGCTCGAGA ACTCGAACGT CGACCTGACG
TCGCAGCTCG TCAACCTGAT CACCGCGCAG CGCAACTACC AGGCGAACGC GCAGACGATC
AAGACGCAGC AGACCGTCGA CCAGACGCTC ATCAACCTGT AA
|
|---|
| Protein sequence | MGYQQGLSGL AGASNALDVI GNNIANANTV GFKSSTAQFS DMYANSIATS VNTQIGIGTA
LSSVQQQFGQ GTINTTNSSL DVAINGNGFF QMSNNGVTTY SRDGTFQRDK NGYIVNAQGL
NLMGYLADKN GVVNTAQTVP LQAPTTNISP TATTKITGQF NLNSQDKVPT KTPFDATDTS
TYNYSTSVQV YDSLGGSQAV NMYFVKSAAG TWEAYAGVQG GATTDLGTVT FDSSGAIKST
TTGTPAVPTT SVGQFQFTVP TTDGSTTPQP LTLDLTGTTQ FGGKDGVNNL AQDGYASGTL
TTFSIGADGK LTGNYSNGQT AVLGQIAIAN FNNPNGLVNL GGNQYAETAA SGVPQISAPG
STNHGTLQGS ALENSNVDLT SQLVNLITAQ RNYQANAQTI KTQQTVDQTL INL
|
|---|
| |