| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3003 |
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| Symbol | |
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| ID | 4310590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3322179 |
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| End bp | 3324299 |
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| Gene Length | 2121 bp |
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| Protein Length | 706 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150843 |
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| Product | phospholipase C |
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| Protein accession | YP_774893 |
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| Protein GI | 115353054 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCAT CCAGCCGCCG CCGTTTCCTG CATACCGTCG CACAATCGGC GGGCGCCGCC
GTCGCGCTCA ACGCGTTCCC TGAATCGATC CGCCGCGCGC TCGCGATTCC GGCCGCGCGC
GGCACCGGCA CGATCCGCGA TGTGCAGCAC ATCGTCGTGT TCATGCAGGA GAACCGCTCG
TTCGACCATT ACTTCGGACA CCTGCGCGGC GTGCGCGGCT ACAACGACCG CTTCCCGATC
CCGCTGCCGA ACGGCAAGCC GGTGTGGTAC CAGCCGTCGA AGGAAGACCC GACGAAACCG
GTGCTGCCGT TTCGGCTCGA CACGAAGACG ACCAGCGCGC AGTGCCTCGG CGCGCTCGAC
CATTCGTGGG CGAAGACCCA CGCGGCGATC GACGGCGGCC GCTACGACCA GTGGCCCGCG
AACAAGACCG ACATGACGAT GGGCTATCAC GTGCGCGAGG ACATCCCGTT CCACTATGCG
CTCGCCGATG CGTTCACCGT GTGCGACCAC TACTTCTGCT CGCTGCCGGG GCCGACGCAC
CCGAACCGCG CGTACCTGAT GACGGGCACG GTCGACCCGA CCGGCAAGTT CGGCGGCCCG
CTGCTCGACA ACGCCGACTA CGTCGACGGC GACCTGCCGC CCGCGTATCA GCTGCTGTCG
TGGACGACCT TCCCCGAACG GCTCGAGGCG CACGGCGTGT CGTGGCAGAT CTACCAGCAG
GGGCTCACCT GGGCTGACCC GTACAACGGC AACTACGGCA CGAACATCCT GCAGAACTTC
ACGAACTTCA TCAACGCGAA GCCGGGTTCG TCGCTGTACC AGCGCGCGCA GACGGTGCGC
ACGCTCGACA ACCTGAAGGA CGACGTGATC AACGACCGGC TGCCGCAGGT GTCGTGGCTG
CTGCCGCCCG CCGCGTTCTC GGAGCATCCG AAATACACGC CCGCGTACGG CGCGAACTAC
ACGTCGCAGA TCCTCGACGC GCTGACGTCG AATCCGGACG TGTGGGCGAA GACCGTGCTG
TTCATCATGT ACGACGAGAA CGACGGCTTC TTCGACCACG TCGTGCCGCC GCAACCGCCC
ACCTCCGCCG CGCAGGGCGC GTCGACCGTG ACGACCGACG GCGAGCTGCA TACCGTCGTG
AACCCGGGGC GCGGCGGCAG CTACACCGCC GACGGGCTGC CGTACGGCCT CGGGCCGCGC
GTGCCGATGA CGGTCGTGTC GCCGTGGTCG AAAGGCGGCT TCGTGTGCTC CCAGGTGTTC
GACCACACGT CGGTGATCCG CTTCATCGGC GAGCGCTTCG GCATCGACGA GCCGAACATC
ACGCCGTGGC GCCGCACCGT GTGCGGCGAC CTCACCGCCG CGTTCGACTT CCGCTCGTCC
GACGCATCGT TTCCGTCGCT GCCCGATACG AGCCAGTACC GCTCGATCGC CGACCAGCAA
TGCACGTCGC AACCCGCGCC CACCGTGCCC GCGACGCCGT CGCCGATCGT CCCGCAGGAG
CCCGGCGTGC GGCCCGCACG CGCGCTGCCT TACGAACTGC ATGTGAACGC GAGCATCTAC
GGCGGCAACA CGCTGCGCAT CGAGTTCGCG AACCGCGGCA ACCAGGGCGC GCACTTCCAG
GTGTACGCGA CGAACCGCAC CGACGGCCCG TGGCGCTACA CGGTCGGCGC GCGCCGCGTG
CTGCACGCGG ACTTCGACCT GACGGAGACG AACGGCGTGT ATGCGTTCTC GGTGTACGGG
CCGAACGGCT TCGTCCGGAT GTTCGCGGGC AACGTGTCGG TCGCGACCGC GCGCCGCCGC
AACCACGCGC AGCCGGAGGT GAAGGCCGGC TACGACATCG CGAACGGCAA CCTGTACCTG
AAGCTGCGCA ACCATGGCGC AGGCCACGTC ACGCTGACGC TGGCCGACAA CGCATACGGC
GCGCCCGCGC GCCAGGTGAC GCTGCACGGC GGCGACGAAC GCGTCGAGCA GTGGGCGCTC
GCGTCGAGCC ACCACTGGTA TGACGTTACG GTGAGCGACG GCGCGAACGG CACGTTCTCG
CGCCGCTTCG CGGGTCACGT CGAGAACGGC CGGTCGAGCT ACTCGGATCC GGCCGCGGTG
GCGCCCGTCT CGGCGTCGTA G
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| Protein sequence | MTSSSRRRFL HTVAQSAGAA VALNAFPESI RRALAIPAAR GTGTIRDVQH IVVFMQENRS
FDHYFGHLRG VRGYNDRFPI PLPNGKPVWY QPSKEDPTKP VLPFRLDTKT TSAQCLGALD
HSWAKTHAAI DGGRYDQWPA NKTDMTMGYH VREDIPFHYA LADAFTVCDH YFCSLPGPTH
PNRAYLMTGT VDPTGKFGGP LLDNADYVDG DLPPAYQLLS WTTFPERLEA HGVSWQIYQQ
GLTWADPYNG NYGTNILQNF TNFINAKPGS SLYQRAQTVR TLDNLKDDVI NDRLPQVSWL
LPPAAFSEHP KYTPAYGANY TSQILDALTS NPDVWAKTVL FIMYDENDGF FDHVVPPQPP
TSAAQGASTV TTDGELHTVV NPGRGGSYTA DGLPYGLGPR VPMTVVSPWS KGGFVCSQVF
DHTSVIRFIG ERFGIDEPNI TPWRRTVCGD LTAAFDFRSS DASFPSLPDT SQYRSIADQQ
CTSQPAPTVP ATPSPIVPQE PGVRPARALP YELHVNASIY GGNTLRIEFA NRGNQGAHFQ
VYATNRTDGP WRYTVGARRV LHADFDLTET NGVYAFSVYG PNGFVRMFAG NVSVATARRR
NHAQPEVKAG YDIANGNLYL KLRNHGAGHV TLTLADNAYG APARQVTLHG GDERVEQWAL
ASSHHWYDVT VSDGANGTFS RRFAGHVENG RSSYSDPAAV APVSAS
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