Gene Bamb_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3000 
Symbol 
ID4310587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3319509 
End bp3320510 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content73% 
IMG OID638150840 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_774890 
Protein GI115353051 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCGA TCTCCTACGA ACGCGCCACC GACGTCGCCG CTGCCGTGCG CGCGGCGCAG 
CGGCCGGGCG CGGCGTTCAT CGGCGGCGGC ACGAACCTGC TCGACCTGAT GAAGGGCGGC
GTCGCACGGC CCGTCGCGCT CATCGACATC ACGCGCATCG CGGGCCTCGA CACGGTCGAT
GCACTGCCCG GCGGCGGGCT GCGCATCGGT GCGCTCGTGC GCAACAGCGA CGCGGCCGAC
CATCCGCGCA TTCGCACCGA CTATCCGCTG CTGTCGCAAG CGCTGCTCGC CGGCGCGTCC
GCGCAATTGC GCAACATGGC GACGGTGGGC GGCAACCTGA TGCAGCGCAC GCGCTGTCCG
TATTTCTACG ATCCGGCGTT CGCGCAATGC AACAAGCGCG CGCCGGGCAG CGGCTGCGCG
GCAATCGGCG GCCACAACCG GATGCACGCG ATACTCGGCG CGAGCCCGCA GTGCGTGGCG
GTGAACCCGT CGGACATGAG CGTCGCGCTC GCGGCGCTCG ACGCCGTCGT GCAGGTCAGC
GGCCCGCACG GCGCGCGGCA GATTCCGTTC GCGTCGTTTC ACCGCTTGCC CGGCGATCGG
CCCGATCTCG ACACGACGCT CGAGCCCGGC GAACTGATCA CCGCGGTCGA CCTGCCGCCG
CCGCGCTTCG CCGACCATGC GCACTATCTG AAGGTGCGCG ACCGTGCGAG CTACGCGTTC
GCGCTGGTGG CCGTGGCCGC CGCATTGCGG ATGGACGGCC CGCGCATTGC GGAGGCGCGG
ATCGCGCTCG GCGGCGTCGC GCACAAGCCG CTGCGCGCGA CGGCCGCGGA ACGGCACCTC
GCGGGGCGCG CGCCGACCGA TGCCGCGCTG CGCGAGGCGG CCGCGCTCGA GTTGCGCGAT
GCGCGGCCGC TCGACGGTAA CGGATTCAAG GTCGCGCTCG CGCAGCGCGC GATCGTGCGC
GCGGTGACCA TTGCCGCCGG CGCGACGGGA GGTGCCGCAT GA
 
Protein sequence
MEAISYERAT DVAAAVRAAQ RPGAAFIGGG TNLLDLMKGG VARPVALIDI TRIAGLDTVD 
ALPGGGLRIG ALVRNSDAAD HPRIRTDYPL LSQALLAGAS AQLRNMATVG GNLMQRTRCP
YFYDPAFAQC NKRAPGSGCA AIGGHNRMHA ILGASPQCVA VNPSDMSVAL AALDAVVQVS
GPHGARQIPF ASFHRLPGDR PDLDTTLEPG ELITAVDLPP PRFADHAHYL KVRDRASYAF
ALVAVAAALR MDGPRIAEAR IALGGVAHKP LRATAAERHL AGRAPTDAAL REAAALELRD
ARPLDGNGFK VALAQRAIVR AVTIAAGATG GAA