Gene Bamb_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2980 
Symbol 
ID4310567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp3288695 
End bp3290074 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content71% 
IMG OID638150820 
Productadenosylmethionine--8-amino-7-oxononanoate transaminase 
Protein accessionYP_774870 
Protein GI115353031 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID[TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCG CCGTTTTACC CCCCGGAGTC GCCTTGAGTA CGCCAGCCAC CGACGACTGG 
GTCGCGCGCA GCCTGCGCGC GGTCTGGCAT CCCTGCACCC AGATGAAGCA CCACGAGCGC
CTGCCGCTCA TTCCCGTCGC GCGCGGCGCG GGCGTGTGGC TGTACGACCG CGACGGCCGC
CGCTACTTCG ATGCGATCAG CTCATGGTGG GTGAACCTGT TCGGCCATGC GAACCCGGAC
ATCAACGCGG CACTGAAGGA CCAGCTCGAC ACGCTCGAGC ACGCGATGCT CGCCGGCTGC
ACGCACGAGC CGGCGATCGA ACTCGCCGAG CGGCTGCACG CGCTCACCGC GCGCACGCTC
GGCCATGCGT TCTTCGCGTC GGACGGCGCG TCGGCGGTCG AGATCGCGCT GAAGATGAGC
TTCCACGCGT GGCGCAACCG CGGCCGCGCG GACAAGCGCG AGTTCGTGTG CGTCGCGAAC
AGCTATCACG GCGAGACCAT CGGCGCGCTC GGCGTGACCG ACGTGGCGCT GTTCAAGGAT
GCGTACGATC CGCTGATCCG CAACGCACAC GTGGTCGCGT CGCCCGATGC GCGCGGCGCG
CAGCCGGGCG AAACGGCCGC CGACGTCGCG GGCCGCGCGC TCGACGACGT GCGGCGCCTG
TTCGCCGAAC GCGCGGACCG GATCGCCGCG CTGATCGTCG AGCCGCTCGT GCAATGCGCG
GCCGGCATGG CGATGCACGA TCCGTCGTAC GTGCGCGGGC TGCGCGCGCT GTGCGACGAA
TTCGGCGTGC ATCTGATCGC CGACGAGATC GCGGTCGGCT GCGGCCGCAC CGGCACCTTC
TTCGCGTGCG AACAGGCCGG CGTCTGGCCC GATTTCCTGT GCCTGTCGAA GGGCATCAGC
GGCGGCTACC TGCCGCTGTC GCTCGTGCTC ACGCGCGACG ACGTGTTCGC GGCCTTCTAC
GACGACGACA CGACGCGCGG CTTCCTGCAT TCGCATTCGT ACACGGGCAA CCCGCTCGCG
TGCCGCGCGG CGGTCGCGAC GCTCGACCTG TTCGCGCGCG ACGACGTGCT CGCCGCCAAC
ACGCGCAAGT CGGCCGCGAT GCGCGCCGCG CTCGCGCCGC TCGACGCGCA CCCGCAGGTG
CGTCACCTGC GCGAGCGCGG CACGCTGTTC GCATTCGACG TCGCGCTCGA CGGCGACGCG
GCACGCGGCT TCTCGCGGCG CTTCTTCGAG CGCGCGCTCG AACGCGAACT GCTGCTGCGT
CCGATCGGCA CGACTGTGTA CCTGATGCCG CCGTACGTGA TGAGCGACGA CGACATCGCG
TGGCTTGCGC AGCGCACGCG CGACACGCTG GATGCGACGC TCGCGGAGAT CATGCAATGA
 
Protein sequence
MPAAVLPPGV ALSTPATDDW VARSLRAVWH PCTQMKHHER LPLIPVARGA GVWLYDRDGR 
RYFDAISSWW VNLFGHANPD INAALKDQLD TLEHAMLAGC THEPAIELAE RLHALTARTL
GHAFFASDGA SAVEIALKMS FHAWRNRGRA DKREFVCVAN SYHGETIGAL GVTDVALFKD
AYDPLIRNAH VVASPDARGA QPGETAADVA GRALDDVRRL FAERADRIAA LIVEPLVQCA
AGMAMHDPSY VRGLRALCDE FGVHLIADEI AVGCGRTGTF FACEQAGVWP DFLCLSKGIS
GGYLPLSLVL TRDDVFAAFY DDDTTRGFLH SHSYTGNPLA CRAAVATLDL FARDDVLAAN
TRKSAAMRAA LAPLDAHPQV RHLRERGTLF AFDVALDGDA ARGFSRRFFE RALERELLLR
PIGTTVYLMP PYVMSDDDIA WLAQRTRDTL DATLAEIMQ