| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2934 |
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| Symbol | |
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| ID | 4310678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3235622 |
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| End bp | 3237757 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638150774 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_774824 |
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| Protein GI | 115352985 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCAA CCGCTTCCCC CGAACCCTCC CGCGCCGGCA CCGTCACGCG CGAACGGCGC
GACAAGGTGC TCGTCGTCAC GATCGACCAT CCGCCCGTCA ATGCGTTGTC CGCCGACGTG
CGGCGCGGCC TTTCCGACGC GCTCGACGCC GCGCAGACCG ACGACGCGAT CCGCGCGGTG
CTGATCGTCG GCGCAGGCCG CAACTTCATC GCGGGCGCCG ACATCCGCGA ATTCGGCAAG
CCGCCGGTGC CGCCGTCGCT GCCCGACGTG TGCGAGCAAA TCGAGTCGAG CGCGAAGCCG
GTCGTGGTCG CGCTCCACGG CGCGACGCTC GGCGGTGGCC TCGAGGTCGC GCTCGCCGCG
CATTACCGGC TCGCGGTGCC CGGCGCGAAG CTCGGGCTGC CCGAAGTCAC GCTCGGCCTG
CTGCCCGGCG CGGGCGGCAC GCAGCGCGCG CCGCGCCTGA TCGGCGCGAA GGCCGCGCTC
GACCTGATGC TGACGGGGCG TCACGCAAGC GCCGACGAAG CGCTCGCGCT CGGCCTCATC
GATCGCCTCG CGCACAGCGA CGACACGCTC GCCGAAGGCC TGGCCTATGC GCAGGAACTC
GTGTCGCTCG GCGCGCCGGC ACGGCGCACG CGCGATGCGC GGGGGCTCGC CGATCGCGTG
AGCGCGCAGG CCGCGATCGA CGCGGCGCGC GCCGATTTGC CGAAGAAGTC GCGCGGCCTG
TTCTCGCCGG CGAAGATCGT CGACGCGGTC GAGGCCGCGC TCACGCAGTC GTTCGACGCG
GGGATGAAGC TCGAGCGCAG CCTGTTCCTG CAGTGCATCG ACAGCCCGCA GCGCGCGGGC
CTCGTGCACG CGTTCTTCGC GGAGCGTGAG GCGGCGAAGG CGCCCGAGGC GCGCCGCGCG
AGCGCGCGTC CGGTCGAGCG GATCGGCGTG GTCGGCGGCG GCACGATGGG CGCGGGGATC
GCGGTCGCGG CGCTCGATGC CGGGCTGCCC GTGACGATGA TCGAGCGCGA CGAAGCGGCG
CTCGCACGCG GGCGCGCGCA CGTCGAGAAG GTCTACGACG GTCTCGTCGC GAAGGGCCGG
ATGACGCCGG CCGCGCATGC GGCGCGGCTT GCGCGCTTCA AGGGCAGCAC GTCGTACGAC
GCGCTCGCGC AGGCCGACGT CGTGATCGAG GCCGTGTTCG AGGACATGGC CGTGAAGCAG
GCGGTGTTCG CCGAACTCGC GCGCGTGTGC AAGCCGGGCG CGGTGCTCGC GACCAACACG
TCGTATCTCG ACATCGACGA GCTGGCGGCC AGCATCGACC GGCCGGCCGA CGTGATCGGC
CTGCATTTCT TCTCGCCGGC CAACGTGATG AAGCTGCTCG AGATCGTCGT GCCGGCCCGC
GTGAGCGCGG AGGTCGTCGC GACGGCGTTC GCGCTCGCGA AGCAGCTGAA GAAGACGCCG
GTGCGCGCGG GCGTGTGCGA CGGCTTCATC GGCAACCGGA TCCTCGCGGT CTACCGCACC
GCGGCCGACT ACCTGATGGA GGACGGCGCG TCGCCGTACC AGATCGATCG CGCGGTGCGC
GAATTCGGCT TCCCGATGGG ACCGTTCCAG GTCGTCGATC TCGCGGGCGG CGACATCGGC
TGGGCGACCC GCAAGCGCCG CGCGGCGACG CGCGACCCGC GCGCGCGCTA CGTGGAAATT
TCCGACCGGC TGTGCGAGCG CGGCTGGTTC GGGCAGAAGA CCGCGCGCGG CTACTACCTG
TACCCGGACG GCGCACGCGT CGGCACGCCG GACCCGGAAG TCGAGGCCAT CGTCGCCGAC
GAGCGCGCGA AGAAGGGCAT CACGCCGCGC GCGTTCAGCG ACGACGAGAT CCTGCGCCGC
TACCTCGCCG CGATGATCAA CGAAGGCGCG AACGTCGTGC ACGAGAAGAT CGCGCTGCGC
CCGCTCGACG TCGACGCGGT GTTCCTGCAC GGCTACGGCT TCCCGCGCTA TCGCGGCGGC
CCGATGCACT ACGCGGACAC GGTCGGCCTC GCGAACGTGC TCGCCGACAT TCGCGCGTTC
GCGAACGAGG ATCCGCTGTT CTGGAAGCCT TCGCCGCTGA TCGTCGAGCT GGTCGAGCGC
GGCGCGGATT TCGCGAGCCT GAACCACATC GACTGA
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| Protein sequence | MHSTASPEPS RAGTVTRERR DKVLVVTIDH PPVNALSADV RRGLSDALDA AQTDDAIRAV
LIVGAGRNFI AGADIREFGK PPVPPSLPDV CEQIESSAKP VVVALHGATL GGGLEVALAA
HYRLAVPGAK LGLPEVTLGL LPGAGGTQRA PRLIGAKAAL DLMLTGRHAS ADEALALGLI
DRLAHSDDTL AEGLAYAQEL VSLGAPARRT RDARGLADRV SAQAAIDAAR ADLPKKSRGL
FSPAKIVDAV EAALTQSFDA GMKLERSLFL QCIDSPQRAG LVHAFFAERE AAKAPEARRA
SARPVERIGV VGGGTMGAGI AVAALDAGLP VTMIERDEAA LARGRAHVEK VYDGLVAKGR
MTPAAHAARL ARFKGSTSYD ALAQADVVIE AVFEDMAVKQ AVFAELARVC KPGAVLATNT
SYLDIDELAA SIDRPADVIG LHFFSPANVM KLLEIVVPAR VSAEVVATAF ALAKQLKKTP
VRAGVCDGFI GNRILAVYRT AADYLMEDGA SPYQIDRAVR EFGFPMGPFQ VVDLAGGDIG
WATRKRRAAT RDPRARYVEI SDRLCERGWF GQKTARGYYL YPDGARVGTP DPEVEAIVAD
ERAKKGITPR AFSDDEILRR YLAAMINEGA NVVHEKIALR PLDVDAVFLH GYGFPRYRGG
PMHYADTVGL ANVLADIRAF ANEDPLFWKP SPLIVELVER GADFASLNHI D
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