| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2907 |
|---|
| Symbol | |
|---|
| ID | 4310756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 3206526 |
|---|
| End bp | 3207050 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638150747 |
|---|
| Product | appr-1-p processing domain-containing protein |
|---|
| Protein accession | YP_774797 |
|---|
| Protein GI | 115352958 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGGA TCGGTTCCAC CACGCTCGAC GCGCAACGCG TCGACATCAC GACGCTCGAC
GTCGACGCGA TCGTCAACGC CGCGAACGGT TCGCTGCTCG GCGGCGGCGG TGTCGACGGC
GCGATTCATC GCGCGGCCGG CCCCGGCTTG CTGGCCGAGT GCCGCACGCT CGGCGGCTGC
GCGACCGGCG ACGCGAAACT CACGCGCGGC CACGGGCTGC CGGCGCGGTA CGTGATTCAT
GCGGTCGGCC CGGTATGGCA CGGCGGTGGG CGCGGCGAGC CCGATCTGCT CGCCGCGTGC
TACCGGCGCG CGATCGAGCT GGCCGAGGAG GTTGCGGCGA CATCGATCGC ATTCCCGGCG
ATCAGCTGCG GCATATACCG CTATCCGGCC GACGAGGCCG TCGACATCGC GGTCGGCACG
GTCGTCGACA TGCTGCCGCA GGCGCCGAAC CTCGCACGCG TGGTGTTCGC GTGTTTTTCA
TCCGACATCT ACGACCTGTA TCGCGCGCGG CTCGCGCGCA GCTAG
|
|---|
| Protein sequence | MLRIGSTTLD AQRVDITTLD VDAIVNAANG SLLGGGGVDG AIHRAAGPGL LAECRTLGGC
ATGDAKLTRG HGLPARYVIH AVGPVWHGGG RGEPDLLAAC YRRAIELAEE VAATSIAFPA
ISCGIYRYPA DEAVDIAVGT VVDMLPQAPN LARVVFACFS SDIYDLYRAR LARS
|
|---|
| |