| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2623 |
|---|
| Symbol | |
|---|
| ID | 4311348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2886623 |
|---|
| End bp | 2887132 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638150461 |
|---|
| Product | flavin reductase domain-containing protein |
|---|
| Protein accession | YP_774513 |
|---|
| Protein GI | 115352674 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.906028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATG CCAACCCGCC GGACTTCGAT TCGGCCGCAT TCCGCCAGGC GCTCGGCCAG
TTCGCGACGG GCGTCACCGT CATCACGACG CAGGCGCCGT CCGGGCAGTT GATCGGCATC
ACCGCAAGCT CGTTCAACTC GGTGTCGCTC GATCCGCCGC TCGTGCTGTG GAGCCTCGCG
CACAAATCGG CGTCGACGCC GGTGTTCCGC AGCAACAGCC ATTACGTGGT GAACGTGCTC
GCGGCCTCGC AGATCGACCT GTGCAAGCGC TTCTCGACCT ACAAGGGCGA CCGCTTCGAA
GGGATCGCGC ACGTGGCCGG CAACTCGGGC ATGCCGGTGC TCGACGGTGC GCTCGCGTGG
TTCGAATGCC ACAACCGCAG CCGCTACGAC GAAGGCGATC ACGTGATCTT CGTCGGCGAA
GTGGAACGCT GCGGCGTGCG CGCGGTATCG GATGCCGCGC CGCCGCTCGT GTTCCACGGC
GGCGGCTTCC ACGGGCTCAC ACCGCTTTGA
|
|---|
| Protein sequence | MNHANPPDFD SAAFRQALGQ FATGVTVITT QAPSGQLIGI TASSFNSVSL DPPLVLWSLA
HKSASTPVFR SNSHYVVNVL AASQIDLCKR FSTYKGDRFE GIAHVAGNSG MPVLDGALAW
FECHNRSRYD EGDHVIFVGE VERCGVRAVS DAAPPLVFHG GGFHGLTPL
|
|---|
| |