| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2618 |
|---|
| Symbol | |
|---|
| ID | 4311343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2881767 |
|---|
| End bp | 2883089 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638150456 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_774508 |
|---|
| Protein GI | 115352669 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1801] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGACG GCAGGACGCG GCGCAACACG CCGACGCAAC GACAGCAGCG CGACGAAGCG
GACGGGTCGC ACGCCGACGG GCAGTTCGAC CTGTTCGGCG CGCCGCCCGA CGACGCACGC
GCGGCGGCTG CGCCCTTCGA CGATGACCAC CCAGCCGGTG CCGGCGAACG CGTGACGCCT
GGCAAGCACG ATGCCGCGCA ACTGGCAAAG TCGCCTGCGC GCGCGGGCCG TGCGTCGCCC
CGCCCTTCCT CCGATCAGGA ACCGGAACCG CCCGCCGCCT CAGGGCTGCT GTGGGACGAC
CCGTTGCCGC CTGCCACGCC GCCGAAGAAG AGCAGGCGCC AGCGCGGCGT GCCGCCCGCA
CCGGTTTCCG CGGAAGTCGC CGACGTGGCG GCCGCCCTGC CGCCGAATGT GCGGCTCGGC
ACGTCGTCGT GGTATTTCCC CGGCTGGGAC GGCATCGTCT ACGACGGCGA TTTCGCGCAG
ACGAAACTGT CGCGCGAGGG GCTCGAAGCG TACGGCGCGC ATCCGCTGCT GAAGAGCGTA
AGCCTCGACC GCTCGTTCTA CGGCCCGCTG TCGGTGGCCG ACTACCTGCG CTACGCACAA
CAGGTGCCGG ACGACTTCCG CTTCGTCGTG AAGGCGCCGG CGTCCGTCAC CGACGCGGTC
GTGCGCGGCC GGCGCGGCGA GCCGTCGGGC CCGAACCCGA CCTTTCTCGA CGCGCAGCTC
GCCATCCGGG AATTCGTGCA GCCGTGCATC GAAGGGCTCG GCAAGAAGGC CGGCGTGCTG
GTGTTCCAGT TTTCGCCGAT GCCCGATCAA CTGCTCGTCG AACCGGCCGC GCTGATCGAC
CGGCTGTCGG CGTTCTTCGC GGCGCTGCCG CCGCTGCCGC TAGACGCCGA CGGCACGCGC
TACGCGATCG AGATCCGCGA CGCGTGCCTG CTCACGCCGC GCTTCATCCG CGCGCTCGCG
GCGCTGGGCG TGCGCTACTG CGTCGGCCTG CATGCGCGGA TGCCCGACCC GCTGCGCCAG
GCGGCCGCGC TCGCGCTGCT CGACGGCGAC GCGCCGGGCC CGCTGATCGT GCGGTGGAGC
CTGCACGGCG GATTCAAGTA CGAACAGGCG AAGGCGAAGT ACGAGCCGTT CGACAAGCTC
GTCGACGAAG ATCCGGCCAC GCGCTCGGCG CTCGCCGAGC TGGCCGCGCG CTACGCGCTG
GCCGGACAGC CGGTGATCAT CACGATCAAC AACAAGGCGG AAGGCTCCGC GCCGCTGTCG
TGCGTCGCGC TCGCGCGCGA GATCGCCGCC GCGTGCGCGC AGTGGCGCAG CGAGGCGGCG
TAG
|
|---|
| Protein sequence | MGDGRTRRNT PTQRQQRDEA DGSHADGQFD LFGAPPDDAR AAAAPFDDDH PAGAGERVTP
GKHDAAQLAK SPARAGRASP RPSSDQEPEP PAASGLLWDD PLPPATPPKK SRRQRGVPPA
PVSAEVADVA AALPPNVRLG TSSWYFPGWD GIVYDGDFAQ TKLSREGLEA YGAHPLLKSV
SLDRSFYGPL SVADYLRYAQ QVPDDFRFVV KAPASVTDAV VRGRRGEPSG PNPTFLDAQL
AIREFVQPCI EGLGKKAGVL VFQFSPMPDQ LLVEPAALID RLSAFFAALP PLPLDADGTR
YAIEIRDACL LTPRFIRALA ALGVRYCVGL HARMPDPLRQ AAALALLDGD APGPLIVRWS
LHGGFKYEQA KAKYEPFDKL VDEDPATRSA LAELAARYAL AGQPVIITIN NKAEGSAPLS
CVALAREIAA ACAQWRSEAA
|
|---|
| |