| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2595 |
|---|
| Symbol | |
|---|
| ID | 4308930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | + |
|---|
| Start bp | 2858360 |
|---|
| End bp | 2859151 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638150433 |
|---|
| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
|---|
| Protein accession | YP_774485 |
|---|
| Protein GI | 115352646 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
|---|
| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0944076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATC CGCAGCCCTT CATCGCCGTC ATTCCTGCCC GGCTCGCATC GACGCGCCTG
CCGAACAAGC CGCTCGCCGA TCTCGGCGGC AAGCCGATGG TCGTGCGCGT CGCCGAGCGC
GCGCGCGAAG CGGGTGCGCA GCAGGTGCTC ATCGCGTCCG ACGCGCAGAG CGTGCTCGAC
GCGGCACGCG ATCACGGTTT CGAAGCGGTG CTGACGCGCG CCGACCATCC GTCCGGCACC
GACCGGCTCG CGGAAGTCGC CGCGACGTTC GGATGGAGCG ACGACACCGT CGTCGTCAAC
GTACAGGGCG ACGAACCGCT GATCGACCCG GTGCTCGTGC GCGACGTAGC GTCGCACCTC
GCCGCGCATC CGGACTGCGC GATCGCGACC GCCGCGCACC CGATCCACGA CGCGGCCGAC
GTGTTCAACC CGAACGTCGT GAAGGTCGCG CTCGACGCGC GCAACGTCGC GATGTACTTC
TCGCGTGCGC CGATTCCGTG GAGCCGCGAC GCCTATCTGC CGCACTGGCC CGACGTCTCA
GCCATGCCTG CGCCGGCCTT TCCGGTCCAT CGCCACATCG GCCTCTATGC GTATCGCGCG
CGTTTCCTGC GCACTTATCC GTCGCTCGCG CAGGCGCCCG TCGAGCAGGC TGAGCAGCTC
GAACAGCTGC GCGCGATGTG GCACGGCGAG CGCATTGCCG TGCTGATTAC CGAGCACGCG
CCCGAGGCCG GCATCGACAC GCCGGCCGAT CTCGCACGCG TGCAGGCCCT TTTTCGTCCG
GGTTCAAAAT AA
|
|---|
| Protein sequence | MTHPQPFIAV IPARLASTRL PNKPLADLGG KPMVVRVAER AREAGAQQVL IASDAQSVLD
AARDHGFEAV LTRADHPSGT DRLAEVAATF GWSDDTVVVN VQGDEPLIDP VLVRDVASHL
AAHPDCAIAT AAHPIHDAAD VFNPNVVKVA LDARNVAMYF SRAPIPWSRD AYLPHWPDVS
AMPAPAFPVH RHIGLYAYRA RFLRTYPSLA QAPVEQAEQL EQLRAMWHGE RIAVLITEHA
PEAGIDTPAD LARVQALFRP GSK
|
|---|
| |