| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2486 |
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| Symbol | |
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| ID | 4308873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2746331 |
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| End bp | 2748166 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638150323 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_774376 |
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| Protein GI | 115352537 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.723441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGGGTC AGGCGAACCA GCAAGCATAT CCGGCGCATG AGGCGGCGCC GCGCGAACCG
TGCGCGGCCC GGCACGCGGG TGATCGCGCG CGGCGCGGCG TCGCTGGCGC GGCCCGGGCC
GCCCTCGTGG GCTGTCTCGC CGCGTGCGTC GTATTGCCGG CCTACGCGAA GTACGACGTC
GACATCGACG CGCCGCGCTC GATCCGCAAG CTCCTGAAGG CCCATCTCGA TATTGCGCGC
TTCGCGAAGC GCGACGACAT CAGCGACGAT CAGTTCGACT TCCTCGTGAC CGCCACGCCG
CAGCAGGTTC GCGACCTGGC CGCGACGGCC GGCTATTTTT CGCCGGTCGT GCGCACCGAC
GTGCGCACGC GCGACGGCAA GCGCGACGTG CGCGTCGCCG TCGATCCGGG GCCGCAGACC
GTCGTGTCGA CGGTCGACCT GACGTTCAAG GGGCCCGTCG ACACCGAGGA TCCGAAGCAG
GAGACCGCGA CCCGCTTCGC GTTCTCGCTG AAGCCCGGCG ATCCGTTCAC GCAGTCCGGC
TGGGACACCG CAAAGGGCGA GGCGCTCAAG CAATTGCAGT CGCGCCGCTA CCTGGGCGCG
AAGATCACGT CGTCGGAGGC GCGCATCGAC CCGCGCACGC AGCGCGCGAC GCTGGCCGTC
GCGTTCGACA GCGGCCCGAC ATTTACGATT GGCAAGGTTG ATGTCGACGG CGTGCGCCGC
TATCCGGAGA AGATCGTCAC GAACGTCAAC CCGCTGTCCG AAGGCGAGAT CTACGACGCG
CGGCGGATCA CCGAGCTGCA GCGGCAACTG CAGAACACGC CGTACTACGC GAGCGTCGCG
ATCGACGTCG GCGACGATAC GTCGAAGCCC GCGCTCACGC CCGTGCACGT AAAGGTCAGC
GAATTCCCGT ACAACAACAT TCGCGGCGGC GTCGGCTACG CGACCGACAC GGGCCCGCAC
GTGCAGGGCT CGTACACGTA CCTCGACACG TTCGGCGCCG CGTGGCCGTT CACCGTGTCG
GGCCGGGTCG ACCAGATTCA GCAGTACGGC CAGGTGCAGC TGTCGATGCC GCCCGGCGAG
AAAGGGTGGA CCAACAGCGT GCTCGCGTCG TACACGAACA CCAACGTGTC GGACACGCGC
ATCTACAGCG CGCGGATCGG CGCGCAGCGC ACGCGCACGG GCCAGTTCAT CGACTACGCG
TACTCGCTGA TGTACTACCA GGACCGGCTC GACCAGAACG GTGCTGGCCC GACCACGAGC
CGCGCGCTGG TGCCGCAGTG GTCGTGGACG CGCCGCAACG TCGACGATCC GCTGTTCCCG
CGCTCGGGCA ACCTGATCCA CGCGGAGGCC GGCTTCGCGA TCAAGGGCGT GCTGACCGAC
CAGACCTTCA TCCGCGGTTA CGCGCGCGGC CAGCAGTACG TGCCGATCGG CAAGCGCGAC
CTGTTCGTGT TCCGCGCGGA GCTCGGCGGC GTGTTCACGA GCGGCAGCTC GACCGGCGTG
CCGGCGTCGC TGCTGTTCCG CGCGGGCGGC TCGAACTCGG TGCGCGGCTA CGGCTACCAG
AGCATCGGCA ACAGCGTCGC CGGCTCCGTG CTGCCGACCA AGTACCTGAT GACGGGCACC
GCCGAATACC AGCACTGGTT CAACCGCGAC TGGGGCGCCG CGACGTTCTT CGACATCGGC
ACCGCGACCG ATGCGTGGGG CGAGAAGGTG TTCTACCCGG GCGTCGGCGT CGGCGCGCGC
TGGCGCAGCC CGGTCGGCCC GATCAACGTC GACGTCGCGT ACGGGCTGCG TAACCACAGC
GTGCGCCCGT ACCTGACGCT CGGCATCGCT TTCTGA
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| Protein sequence | MAGQANQQAY PAHEAAPREP CAARHAGDRA RRGVAGAARA ALVGCLAACV VLPAYAKYDV
DIDAPRSIRK LLKAHLDIAR FAKRDDISDD QFDFLVTATP QQVRDLAATA GYFSPVVRTD
VRTRDGKRDV RVAVDPGPQT VVSTVDLTFK GPVDTEDPKQ ETATRFAFSL KPGDPFTQSG
WDTAKGEALK QLQSRRYLGA KITSSEARID PRTQRATLAV AFDSGPTFTI GKVDVDGVRR
YPEKIVTNVN PLSEGEIYDA RRITELQRQL QNTPYYASVA IDVGDDTSKP ALTPVHVKVS
EFPYNNIRGG VGYATDTGPH VQGSYTYLDT FGAAWPFTVS GRVDQIQQYG QVQLSMPPGE
KGWTNSVLAS YTNTNVSDTR IYSARIGAQR TRTGQFIDYA YSLMYYQDRL DQNGAGPTTS
RALVPQWSWT RRNVDDPLFP RSGNLIHAEA GFAIKGVLTD QTFIRGYARG QQYVPIGKRD
LFVFRAELGG VFTSGSSTGV PASLLFRAGG SNSVRGYGYQ SIGNSVAGSV LPTKYLMTGT
AEYQHWFNRD WGAATFFDIG TATDAWGEKV FYPGVGVGAR WRSPVGPINV DVAYGLRNHS
VRPYLTLGIA F
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