Gene Bamb_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2209 
Symbol 
ID4310115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2433511 
End bp2435199 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content67% 
IMG OID638150036 
Producturocanate hydratase 
Protein accessionYP_774099 
Protein GI115352260 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2987] Urocanate hydratase 
TIGRFAM ID[TIGR01228] urocanate hydratase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCATC CGAAACACAT CGATCCCCGT CTCGATCCGA CGCGCACGAT CCGCGCACCG 
CGCGGCAGCG AGAAGGTCTG CAAGACCTGG CTGGCCGAAG CGGCCTACCG GATGATCCAG
AACAACCTGG ATCCGGAAGT CGCCGAGCAT CCGCACGCGC TCGTCGTGTA CGGCGGCATC
GGCCGCGCGG CGCGCAACTG GGAATGCTAC GACCAGATCC TCGCGTCGCT GAAGGATCTC
GAGGACAACG AAACGCTGCT GATCCAGTCG GGCAAGCCGG TCGGCGTGTT CCGCACGCAC
CCGGATGCGC CGCGCGTGCT GCTCGCGAAC TCGAACCTCG TGCCGCACTG GGCGAACTGG
GATCACTTCC ACGAGCTCGA CCGCAAGGGC CTGATGATGT ACGGCCAGAT GACGGCCGGC
AGCTGGATCT ACATCGGCAG CCAGGGTATC GTGCAGGGCA CCTATGAGAC GTTCTTCTCG
GTCGCGAACC AGCACTTCAA CGGCGACCCG TCGGGCCGCT GGATCCTGAC GGGCGGCCTG
GGCGGCATGG GCGGCGCGCA GCCGCTGGCC GCGACGATGG CAGGTTTCTC GATGATCGCG
GTCGAATGCG ACGAGACGCG CATCGACTTC CGCCTGAAGA CCCGCTACGT CGACAAGAAG
GCGACGACGC TCGACGAAGC GCTCGGCATG ATCGACGAAG CGAAGCGCAC CGGCAAGCCG
GTCTCGGTCG GCCTGCTCGG CAACGCGGCC GACGTGTTCG CGGAACTCGT CAAGCGCGGC
GTCACGCCGG ATTGCGTGAC CGACCAGACG AGCGCGCACG ACCCGATCAA CGGCTACCTG
CCGCAAGGCT GGACCGTCGC GCAATGGCGC GAGGCGCAGA AGGTCGATCC GCAAAGCATC
GTGAAGGTCG CGAAGCAGTC GATGGCCGAG CAGGTGCGCG CGATGCTGAC GCTGCAGGAA
CGCGGCGCGG CCACGCTCGA CTACGGCAAC AACATCCGCC AGATGGCGCT GGAAATGGGC
GTCGAGAACG CATTCGACTT CCCGGGCTTC GTGCCGGCCT ATATCCGCCC GCTGTTCTGC
GAAGGCAAGG GTCCGTTCCG CTGGGTCGCG CTGTCGGGCG ATCCGGAAGA CATCTACAAG
ACCGACCAGA AGGTGAAGGA GCTGATCCCC GACGATGCGC ACCTGCACAA CTGGCTCGAC
ATGGCACGTG AGCGCATCGC GTTCCAGGGC CTGCCGGCAC GGATCTGCTG GGTCGGCGTG
AAGGATCGCT ATCGCCTCGG CCAGGCGTTC AACGAGATGG TGAAGAACGG CGAACTGAAG
GCCCCGATCG TGATCGGCCG CGACCACCTC GACACCGGTT CGGTCGCGAG CCCGAACCGC
GAGACGGAAT CGATGAAGGA CGGTTCGGAC GCCGTGAGCG ACTGGCCGCT GCTGAACGCA
CTGCTGAACA CCGCGGGCGG CGCATCGTGG GTGTCGCTGC ACCACGGCGG TGGCGTCGGG
ATGGGCTTCT CGCAGCACTC GGGCGTCGTG ATCGTCGCCG ACGGTACCGC CGAAGCGCAC
GAGCGTCTCG GCCGCGTGCT GCTGAACGAT CCGGCGACGG GCGTGATGCG CCATGCGGAT
GCCGGCTACG AACTCGCGCA GCAGACGGCC CGCGAAGTCG GCCTGAAGCT GCCGATGCTC
GGCCGCTGA
 
Protein sequence
MNHPKHIDPR LDPTRTIRAP RGSEKVCKTW LAEAAYRMIQ NNLDPEVAEH PHALVVYGGI 
GRAARNWECY DQILASLKDL EDNETLLIQS GKPVGVFRTH PDAPRVLLAN SNLVPHWANW
DHFHELDRKG LMMYGQMTAG SWIYIGSQGI VQGTYETFFS VANQHFNGDP SGRWILTGGL
GGMGGAQPLA ATMAGFSMIA VECDETRIDF RLKTRYVDKK ATTLDEALGM IDEAKRTGKP
VSVGLLGNAA DVFAELVKRG VTPDCVTDQT SAHDPINGYL PQGWTVAQWR EAQKVDPQSI
VKVAKQSMAE QVRAMLTLQE RGAATLDYGN NIRQMALEMG VENAFDFPGF VPAYIRPLFC
EGKGPFRWVA LSGDPEDIYK TDQKVKELIP DDAHLHNWLD MARERIAFQG LPARICWVGV
KDRYRLGQAF NEMVKNGELK APIVIGRDHL DTGSVASPNR ETESMKDGSD AVSDWPLLNA
LLNTAGGASW VSLHHGGGVG MGFSQHSGVV IVADGTAEAH ERLGRVLLND PATGVMRHAD
AGYELAQQTA REVGLKLPML GR