Gene Bamb_2140 details

Gene Information

• Locus tag: Bamb_2140
• ID: 4310273
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: +
• Start bp: 2350764
• End bp: 2351288
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 638149965
• Product: hexapaptide repeat-containing transferase
• Protein accession: YP_774030
• Protein GI: 115352191
• COG category: [R] General function prediction only
• COG ID: [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGATCT ACAAACTGGG CGAGACGGCC CCGACGATCC ACGAAAGCGT ATTCGTCGCC 
GATACGGCGG CCATCATCGG CAAGGTCGTG CTGGAGGAAA ACGCGAGCGT CTGGTTCGGC 
GCGACGATTC GCGGCGACAA CGAGACGATC ACGGTCGGCA CCGGAAGCAA TGTCCAGGAA 
GGCGCGGTCC TGCACACCGA CCCCGGTTTT CCGCTGACGA TTGCGGAAAA CGTGACGATC 
GGGCACCAGG CGATGCTGCA CGGCTGCACG ATCGGCGAAG GTTCGCTGAT CGGGATTCAG 
GCGGTGGTCT TGAATGGTGC GGTCATCGGC CGCAACTGTC TGGTTGGTGC CGGCGCGGTC 
GTGACGGAAG GCAAGGTGTT CCCGGACAAT TCGCTGATTC TCGGCGCCCC GGCGAAAGTC 
GTGCGCGAGC TGTCGGCGGA CGATATCGCG CGACTGCGCG CCAATGCGAA GACGTACGTC 
GAGCGACGTG CGCATTTCAA GGAGCAACTC GTGCGGATCG GGTGA 

 

Protein sequence

MTIYKLGETA PTIHESVFVA DTAAIIGKVV LEENASVWFG ATIRGDNETI TVGTGSNVQE 
GAVLHTDPGF PLTIAENVTI GHQAMLHGCT IGEGSLIGIQ AVVLNGAVIG RNCLVGAGAV 
VTEGKVFPDN SLILGAPAKV VRELSADDIA RLRANAKTYV ERRAHFKEQL VRIG