| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_2108 |
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| Symbol | |
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| ID | 4310241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2315882 |
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| End bp | 2317411 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638149932 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_773998 |
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| Protein GI | 115352159 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.434058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGATT TCCCCTTTCT GAGCCTGGCG ATCTGGGTTC CGATCCTGTT CGGCGCGTGC
CTGCTGCGTG CCGGCTCCGA CCATCATCCG CATCGCACGA GACTGATCGC GCTCGTCGGC
GCACTCGCGG GGCTGGCCGC CGTCGTGCCG CTCGTCACCG GTTTCGATTC GCACTCGGCC
GCGATGCAGT TCACCGAAAC CCGCGACTGG CTGGCGGCAT TCAACGCCGG CTGGCGTGTC
GGGATCGACG GCGCGTCGCT GTGGCTCGTC GTGCTGACCG CCTTCACGAC GCTCGTCGTC
GTGATCGCGT CGTGGGAATC GGTCACGATG CGCGTCGCGC AGTACTACGC GTCGTTCCTG
ATCCTGTCGG GGCTGATGGT CGGCGTGTTC GTCGCGCAGG ACGGGCTGCT GTTCTTCATC
TTCTTCGAGG CGACGCTGAT TCCGCTGTAC CTGCTGATCG GCACGTGGGG CAGGGAGCAT
CGCGTCTACG CGGCCGTGAA ATTCTTCTTC ATCTCGTTCG CGGGTTCGCT GCTGCTGTTG
ATGGCGATGC TGTACCTGTT CGCGAAGTCG CACACGTTCG ACATGAACGC ATGGCGCACG
CTGCAACTCG GCTTTGCGCC GCAGCTGCTG GTGTTTCTCG GCTTCTTCGC CGCGTTCGCG
GTCAAGGTGC CGATGTGGCC GGTGCATACG TGGCTGCGCG ACGTCTACAC GGACGGCCCG
ACGGGCGCCG CGCTGATGCT CGCGATGCTC AAGCTCGGCG GTTACGGCTT CCTGCGCTTC
GCGCTGCCGA TCACGCCGGA CGCGAGCCAC TTCTTCGCGC CGGCCGTGAT CGCGCTGTCG
CTGTTCGCGA TCGTCTACGC GAGCCTGATC GCGCTCGCGC AGACCGACCT CGGCAAGCTG
CTCGCGTATT CGACGGTCGC GCACATGGGG ATCGTCACGC TCGGGCTGTT CCTGTTCAAC
CAGATCGGCG TCGAAGGCGC GATCGTGCAG CTCGTGTCGT ACGGCTTCGT CGCGGGCGCG
ATGCTGCTCT GCGTAAGCGT GCTGGTCGAT CGCACGAAGC AGCGCGAGAT CGGCGCATAC
GGCGGCGTGG CGGGCGTGAT GCCGCGCTTC GCGACGTTCG CGCTGCTGTT CGCGATGGCC
AACGTCGGCC TGCCGGGCAC GTCGGGTTTC GTCGGCGAGT TCATGGTCAT CATGGGCGCG
ATCCGCGTCA ACTTCTGGAT CGGCGCAATC GCGGCACTCA CGCTGATTCT CAGCGCGTCG
TACACGCTGT GGATGGTCAA GCGCGTCGTG TTCGGCAAGA TCGCCAGCCA GCGCATCGCG
AAGCTCGCCG ACTTGAGCCG CCGCGAGATC GTGATGTTCG CATCGCTCGC ACTGATCGTG
CTGATGGTCG GCGTCGATCC GAAGCCGTTC ACCGACGCGA TCGATCCGAC CGTCGCACGG
CTGATCGAAG ACGCCAGCCG TTCGAAGCTG CCGGCCGGGG ACGGCGTTGC ACCGGCGCAG
CCGGCGTTCA TGGCATCGGC GCACGGCTGA
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| Protein sequence | MHDFPFLSLA IWVPILFGAC LLRAGSDHHP HRTRLIALVG ALAGLAAVVP LVTGFDSHSA
AMQFTETRDW LAAFNAGWRV GIDGASLWLV VLTAFTTLVV VIASWESVTM RVAQYYASFL
ILSGLMVGVF VAQDGLLFFI FFEATLIPLY LLIGTWGREH RVYAAVKFFF ISFAGSLLLL
MAMLYLFAKS HTFDMNAWRT LQLGFAPQLL VFLGFFAAFA VKVPMWPVHT WLRDVYTDGP
TGAALMLAML KLGGYGFLRF ALPITPDASH FFAPAVIALS LFAIVYASLI ALAQTDLGKL
LAYSTVAHMG IVTLGLFLFN QIGVEGAIVQ LVSYGFVAGA MLLCVSVLVD RTKQREIGAY
GGVAGVMPRF ATFALLFAMA NVGLPGTSGF VGEFMVIMGA IRVNFWIGAI AALTLILSAS
YTLWMVKRVV FGKIASQRIA KLADLSRREI VMFASLALIV LMVGVDPKPF TDAIDPTVAR
LIEDASRSKL PAGDGVAPAQ PAFMASAHG
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