Gene Bamb_2092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_2092 
Symbol 
ID4309388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2297074 
End bp2298171 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content68% 
IMG OID638149916 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_773982 
Protein GI115352143 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGGG CCGTCGTGTC GTCCCGCGTC GACGCCGCGC GTGCGCGCGT GTCGCCGTCG 
CCCGCGCGCC GCGTCTGGCA GCGCTTTCGC CAGCAGCGCC TCGGCTACTG GAGCTTCGTG
ATCTTCTTCG TCGCGTTCGC CGCGAGCCTC GCGGCGCCGC TGTGGTCGAA CGACAAGCCG
CTCGTCGTGC GCTACGACGA TCACTACTAT TTCCCGATGT TCCATGCGTA CCCGGAGACG
ACCTTCGGCG GCGACTTCCC GGCGCAGGCC GATTATCTCG ATCCGTACGT GCGCAAGCGG
CTCGAGGCGC CGGGCAACTT CGTCGTCTAT CCGCCGAACC GTTACTACTA CGACACGCTG
AACTACTTCT CGAGCGTGCC GAACCCGGCG CCGCCGTCGC GCGAGAACTG GCTCGGCACC
GATGCGCAGG GGCGCGACCT GCTCGCGCGG CTCGTGTACG GGTTCCGTGT ATCGGTCGAG
TTCGGGCTGA TCCTGACCGT GATCGGCACG CTGCTCGGGA TCGCCGCGGG CGCGGTGCAG
GGTTTCTTCG GCGGGCGCAT CGACATCGTC GGACAGCGGC TGATCGAGAT CTGGAGTTCG
CTGCCGGAGC TGTACCTGCT AATCATCTTC GCGTCGATCT TCGAGCCGAG CTTCCTGCTG
CTGATCGTGC TGCTGTCGCT GTTCGGCTGG ATCGGCCTGG CCGACTACGT GCGCGCCGAA
TTCCTGCGCA ACCGGACCCA GGACTATGTG CGCGCGGCTC GCGCGATGGG GCTCACGAAC
TGGCAGATCA TCTGGCGTCA CGTGCTGCCC AACAGCCTGA CGCCCGTGAT CACGTTCCTG
CCGTTCCGGA TGAGCGGCGC GATCCTCGCG CTCACGAGCC TCGACTTCCT CGGACTCGGC
GTGCCGCCGC CGACACCGAG CCTCGGCGAG CTGCTCGCGC AGGGCAAGGG CAACCTCGAC
GCGTGGTGGA TCTCGCTGTC GACGTTCGGC GTGCTGGTCA CGACGCTGCT GCTGCTGACC
TTCATGGGCG ACGCGCTGCG CAACGCGCTC GACACGCGCA TCGCCGACTC GGTGCGCGCC
GCGGGAGGCC AGCGATGA
 
Protein sequence
MNRAVVSSRV DAARARVSPS PARRVWQRFR QQRLGYWSFV IFFVAFAASL AAPLWSNDKP 
LVVRYDDHYY FPMFHAYPET TFGGDFPAQA DYLDPYVRKR LEAPGNFVVY PPNRYYYDTL
NYFSSVPNPA PPSRENWLGT DAQGRDLLAR LVYGFRVSVE FGLILTVIGT LLGIAAGAVQ
GFFGGRIDIV GQRLIEIWSS LPELYLLIIF ASIFEPSFLL LIVLLSLFGW IGLADYVRAE
FLRNRTQDYV RAARAMGLTN WQIIWRHVLP NSLTPVITFL PFRMSGAILA LTSLDFLGLG
VPPPTPSLGE LLAQGKGNLD AWWISLSTFG VLVTTLLLLT FMGDALRNAL DTRIADSVRA
AGGQR