Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_2045 |
Symbol | |
ID | 4311618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 2239867 |
End bp | 2241255 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638149862 |
Product | putative membrane-associated zinc metalloprotease |
Protein accession | YP_773935 |
Protein GI | 115352096 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTGC TGGTCGAACT GATCGCGTTT GCGGTGGCGA TCGGGGTGCT GGTCGTCGTG CATGAGTACG GACATTATCG CGTCGCGCGC TGGTGCGGCG TGAAGGTGCT GCGTTTCTCG ATCGGTTTCG GCCAGCCCGT CGCGCGCTGG GTCAGCCGCC GGACGGGCAC CGAATGGACG CTCTCCGCAC TGCCGCTCGG CGGCTACGTG AAGATGCTCG ACGAGCGCGA GCCGGGGGCG GACATCAAGC CCGAGGAGCT CGCCCAGGCG TTCAACCGGC AATCGGTGTT CAAGCGCATC GCGATCGTCG CCGCCGGCCC GATCGCGAAC TTCCTGTTGG CAATCGTCCT GTTTTCCGTC GTATTCGCCA CCGGGGTGAC CGAGCCGGCC GCGGTGCTCG CGCCGCCGGC CGCCGGCACG GTGGCAGCTC GCGCGGGCTT CGACGGCAAC GAGACGATCG TCTCGATCCG TGACGTGCAC GCAGGCGACG CGCAGGGCAG CGAGGCCGTG CCGGTGCGTT CGTGGTCGGA TCTGCGCTGG AAGCTGCTGG CCGCCGCGTT CGATCATCGC GAGGTCGTGC TCGGTGCGCG CGACGGCGGC GCGTCGACGT TCGACTTCCG CGTCGACCTG CGCAACGTTC CCGAAAGCGC GCTCGACGAC GATTTCATGA CGCACCTGGG CTTCGAGACC GGCGGCGGCA CGTTGTCGGT AGCATCGGTG CAGCCCGGCA GCGCGGCCGA GCGCGCGGGC CTGAAGGCCG GCGACAAGCT GCTCGCGCTC GACGGCAAGC CCATCGGCGG CGCCTCGCGC TTCATCGACG CGGTGAAGCA CCACGCAGGG CAGCCGGTCG ACTTGCGCGT GGAGCGCGGC GGTGCCACGC AGACGGTGTC GATCGTGCCG CAGGCGCAGC GCGACGACGA GACGGGCCAG CAGGTCGGCC GCATCGGCGC GGCGCTGTCG ATGCACACGC CGTCGGTCGA CGTGCGCTAC GGTCCGATCG AGAGCCTGCG GCTCGGTGCG CACCGCACGT GGGACATCGC CGTCTATTCG CTGAAGATGT TCGGGCGCAT GATCACGGGC AACGCGTCGC TGAAGAACCT GTCCGGTCCG GTGACGATTG CGGACTACGC GGGCAAGAGC GCGCGGCTCG GTCCGTCGGC CTTCCTGTCG TTCCTCGCCC TTGTCAGCAT TAGCCTCGGG GTGTTGAACT TGCTGCCGAT TCCCGTTTTG GACGGGGGGC ATCTGTTATA TTATCTGGTT GAAGCCGCGA CCGGGAAAGC CGTTTCGGAG CGCTGGCAGC TGATTCTGCA AAGAGCCGGG TTGATCTGCA TCGTCGCATT GTCGGCGATC GCGCTGTTCA ACGACCTGGC TCGGTTAATC CATTTCTGA
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Protein sequence | MNVLVELIAF AVAIGVLVVV HEYGHYRVAR WCGVKVLRFS IGFGQPVARW VSRRTGTEWT LSALPLGGYV KMLDEREPGA DIKPEELAQA FNRQSVFKRI AIVAAGPIAN FLLAIVLFSV VFATGVTEPA AVLAPPAAGT VAARAGFDGN ETIVSIRDVH AGDAQGSEAV PVRSWSDLRW KLLAAAFDHR EVVLGARDGG ASTFDFRVDL RNVPESALDD DFMTHLGFET GGGTLSVASV QPGSAAERAG LKAGDKLLAL DGKPIGGASR FIDAVKHHAG QPVDLRVERG GATQTVSIVP QAQRDDETGQ QVGRIGAALS MHTPSVDVRY GPIESLRLGA HRTWDIAVYS LKMFGRMITG NASLKNLSGP VTIADYAGKS ARLGPSAFLS FLALVSISLG VLNLLPIPVL DGGHLLYYLV EAATGKAVSE RWQLILQRAG LICIVALSAI ALFNDLARLI HF
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