Gene Bamb_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1979 
Symbol 
ID4311745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp2176302 
End bp2176976 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content60% 
IMG OID638149796 
ProductDSBA oxidoreductase 
Protein accessionYP_773869 
Protein GI115352030 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG TGACGGTGGA AGTCTGGTCG GACTTCGTTT GCCCATGGTG CTGGATTGCA 
AAGAAGCGAT TCGAGAAGGC AGTCCATTCG GTGGCCGGCC AGGTTCAGGT CGTAGTGACC
AACAAGGCCT ATCGCCTCGC CAAGGGAATG CGGCCGATGG ACTACAAGAA CGCCCTGCAT
CAGAAGTTGG GCGGTGCAGC CGGCGCTGAT CGGATGATGA CTGCGGTGAG CACCAACGGG
CTCCTTGAAG GCTTGGTCTA CAACTTCGAC ACCATGCGTT TCGGCGACAC CACTGCCGCG
CATGCACTGG TCAAGAGCAT CAGTTCGCCG GTTCTCGCTC AGATGATGAG TGAGCGGCTT
TACAAGGCCG TAACAACCGA CGGCCTCGAC ATTTTTGACC AGGCCGTCCT CGCCTCGTTG
GCGAAGGAAG TCGGCGTGAC CGACATGCTC GAATTCGACC GCGTACGGGT CGCTTCCGAA
ATCGCTCGCG ACGAGGCGGA GGCGAACAGC ATCGCCAACG GCGTGCCACT GTTCCTCCTC
AACGGCAAGA CATTCCTGTC TGGAGCGCGT GAGGCCGTCG TGTTCGAAAG GGCGCTTCGT
GACGCAGCAG TCGATGTTCC GGGGGCTCTG GACGAAACCG AAGGCGAGAG CTGCGGCATC
GACGGCTGCC ACTGA
 
Protein sequence
MKTVTVEVWS DFVCPWCWIA KKRFEKAVHS VAGQVQVVVT NKAYRLAKGM RPMDYKNALH 
QKLGGAAGAD RMMTAVSTNG LLEGLVYNFD TMRFGDTTAA HALVKSISSP VLAQMMSERL
YKAVTTDGLD IFDQAVLASL AKEVGVTDML EFDRVRVASE IARDEAEANS IANGVPLFLL
NGKTFLSGAR EAVVFERALR DAAVDVPGAL DETEGESCGI DGCH