Gene Bamb_1893 details

Gene Information

• Locus tag: Bamb_1893
• ID: 4311606
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 2078736
• End bp: 2079368
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638149707
• Product: nicotinamidase
• Protein accession: YP_773783
• Protein GI: 115351944
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG1335] Amidases related to nicotinamidase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGCA CCGACGACGT ATTGCTCGTG ATCGACGTGC AGTACGACTT CATGCCGGGC 
GGCGCACTCG CGGTGCCGGA CGGCGATGCG GTCGTGCCGG TGATCAACGC GCTCGCGCAG 
CGCTTCGACC AGGTCGTGCT GACGCAGGAC TGGCACCCGC GCGAACACGT GTCGTTCGCC 
GCGAACCACC CGGGGCACGA ACCGTTCTCG CCGCTCGCGC TGCCGTACGG CGAGCAGGTG 
CTATGGCCCG TGCACTGCGT GCAGGATACC GAAGGCGCGG CGCTGCATCG CGATCTCGAC 
ATTCCGCACG CGAGGCTCGT GATCCGCAAG GGCGGCGACG CCCAGCTCGA CAGCTATTCC 
GCGTTCGTCG AAGCCGACCG CACGACGCGC ACGGGGCTCG CCGGCTATCT GCGCGAGCTC 
GGCGCGAAGC GCGTGTGGTG TTGCGGGCTC GCGACCGACT ATTGCGTCGC ATGGTCCGCG 
CTCGATGCGC GCGCGGCGGG CTTCGAGGCC GCGGTGATCA ACGATGCGTG CCGTGCGATC 
GACCTGAACG GGTCGCTCGC GCACGCATGG CAACAGATGC AGGCGGCGGG CGTCGCACAT 
GTGACGTCCG CGGGCGCACG CCCGACGGCG TAG 

 

Protein sequence

MKRTDDVLLV IDVQYDFMPG GALAVPDGDA VVPVINALAQ RFDQVVLTQD WHPREHVSFA 
ANHPGHEPFS PLALPYGEQV LWPVHCVQDT EGAALHRDLD IPHARLVIRK GGDAQLDSYS 
AFVEADRTTR TGLAGYLREL GAKRVWCCGL ATDYCVAWSA LDARAAGFEA AVINDACRAI 
DLNGSLAHAW QQMQAAGVAH VTSAGARPTA