Gene Bamb_1868 details

Gene Information

• Locus tag: Bamb_1868
• ID: 4311581
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria AMMD
• Kingdom: Bacteria
• Replicon accession: NC_008390
• Strand: -
• Start bp: 2048693
• End bp: 2049373
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 638149682
• Product: phage baseplate assembly protein V
• Protein accession: YP_773758
• Protein GI: 115351919
• COG category: [R] General function prediction only
• COG ID: [COG4540] Phage P2 baseplate assembly protein gpV
• TIGRFAM ID: [TIGR01644] phage baseplate assembly protein V

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGATT TCGAGCTTGG CGAGATGGAT CGCCGCATGG CGTGCCTGAC GCAGTCGGCG 
GTGGTTGAGG CGGTCACATA CGATCCGCCG CGCGTGAAGG TGCGCATCGG CGATTGGGTC 
AGCGATTGGC TCAAATGGCA GGCGGGTGCG GCCGGCAAGG TCCGGCAGTG GCGTCCGCCG 
TCTGTCGACG AAGAGGTCGC GCTGTGGGCA CCGTCTGGCG ATCTCGCGGG CGCGTTCGTA 
GCGCCCGGTT ACTACACGGA GCAGCACGGC GGGTCAGGCC GGTCGAGTCC GGACGAGACG 
GCGACCGATT ACCCGGACGG CGCATTCGAA CAGTACAACC ATGCGAGCCA CGAATACGTA 
CTGTCGGTGC CGGTAGGCGG TCGGATCGTA TTTCGCATCG GCGAAACCGA GTTCGAGCTG 
AAAGCGGACG GCGCGATGCT GCGTAGCGAG AAGCTGCTCG CCGACGTGCC CGATTCGACG 
TTCACCGGCA ATACGACGAC CGAGCGCTTG CTGACGTTCA ACGGCGGTAT GCAGGGCAAG 
TCGGGCGAAG GTGGCGGCGT TGCGGTGAGG GTCGCGGGCG GCGCTGAGTT TACCGACGAC 
GTTGTCGCGG CCGGTAAGTC GGTCAGCAAG CACAAACACC GCGAGCAGGG CGACGGCGAG 
CTGGTTAGCC CTCCCGTTTA G 

 

Protein sequence

MSDFELGEMD RRMACLTQSA VVEAVTYDPP RVKVRIGDWV SDWLKWQAGA AGKVRQWRPP 
SVDEEVALWA PSGDLAGAFV APGYYTEQHG GSGRSSPDET ATDYPDGAFE QYNHASHEYV 
LSVPVGGRIV FRIGETEFEL KADGAMLRSE KLLADVPDST FTGNTTTERL LTFNGGMQGK 
SGEGGGVAVR VAGGAEFTDD VVAAGKSVSK HKHREQGDGE LVSPPV