| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1825 |
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| Symbol | |
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| ID | 4309872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 2013176 |
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| End bp | 2014348 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638149639 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_773715 |
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| Protein GI | 115351876 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0903923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCAA TCGAGGAACT GCAGCGCATC GCCGATGCGC CGTTGCATTC ATGGCTCGGC
ACGCTGATCG TGTCGGTCAT CGTCGTGCTT GTCGTGTTGA TCGTGCATCG TCTCGGCGCA
CGCATCGTCA AGCGCATCGC GCAGCCGTAT CCGCTGATGA GCGTGATCCT GCGCTACATC
GACAAACCGT CGCTCGTCAC GCTCGCGTTG CTCGCGCTCG AATTCGTGTG GCTCCAGGCG
GACGAGAGCA TGTCGTTCGT GCGCGGCATG CGCACCGCGG CCGCGGTCGG CTCGATCGTG
TCGCTGACCT GGCTGCTGGT GCGGCTCGCG GCCGGCGTCG GCGACGCGAT CATCCAGGCC
CATCCGATGG ATACGGCCGA CAACCTCCAC GCGCGGCGCG TCCACACACA GGCCAAGGTG
CTCGTGCGGA CCGTCATGGT GCTGATCGTG ATCATCGGCA CGGGCGCCGC GTTGATGACG
TTCCCGAACG TGCGCCAGAT CGGCGCGAGC CTGCTGGCGT CGGCCGGCGT CGCGGGCCTG
GTCGCCGGTA TCGCCGCGCG GCCGGTGCTC GGCAACCTGA TCGCCGGGCT GCAGATCGCG
CTCACGCAGC CGATCCGGCT CGACGACGTC GTCGTGATCC AGGGCGAGTG GGGGCGCATC
GAGGAAATCA CCGGTTCGTT CGTGTCGGTG CGGCTGTGGG ACCAGCGGCG CCTCGTCGTG
CCGCTGCAGT GGATCATCGA GAATCCGTTC ACGAACTGGA CGCGCAGCAG CGCGGAAATC
ATCGGCACGG TGTACCTGTC GGTCGACTAC CGCACGCCGC TCGCGCCGCT GCGCGAGGAG
CTCGCGCGGC TGGTTCATGC GGCCCCCGAG TGGGACGGGC GCGTCCAGGT ACTGCAGGTG
ACCGACGCGA CCGAGCGCGC GATGCAGTTG CGCGCGCTCG TCAGCGCCGT CGATTCGTCG
TCGTGCTGGG ACCTGCGCTG CCGCGTGCGC GAAGGGTTGA TCGCGTACCT GCAGGCGCGT
TTTCCGCAAT GCCTGCCGCG CAGCCGGATG GAGCTGTATC CGCACGATTC CGCACCGGAC
GCGCCGAATC CCGTTCGCCC GCATGCGCGC CAGCCCGCCG CCAGCACGGC GGCCAACACC
GCCGCCGATC CGCAGGCCGT CGACGGCCGC TGA
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| Protein sequence | MISIEELQRI ADAPLHSWLG TLIVSVIVVL VVLIVHRLGA RIVKRIAQPY PLMSVILRYI
DKPSLVTLAL LALEFVWLQA DESMSFVRGM RTAAAVGSIV SLTWLLVRLA AGVGDAIIQA
HPMDTADNLH ARRVHTQAKV LVRTVMVLIV IIGTGAALMT FPNVRQIGAS LLASAGVAGL
VAGIAARPVL GNLIAGLQIA LTQPIRLDDV VVIQGEWGRI EEITGSFVSV RLWDQRRLVV
PLQWIIENPF TNWTRSSAEI IGTVYLSVDY RTPLAPLREE LARLVHAAPE WDGRVQVLQV
TDATERAMQL RALVSAVDSS SCWDLRCRVR EGLIAYLQAR FPQCLPRSRM ELYPHDSAPD
APNPVRPHAR QPAASTAANT AADPQAVDGR
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