| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1823 |
|---|
| Symbol | |
|---|
| ID | 4309870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 2010677 |
|---|
| End bp | 2011741 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638149637 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_773713 |
|---|
| Protein GI | 115351874 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0794741 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTG CCCAGATCGC CCCGCTGACC GAATCGGTGC CGCCGAAGCT GTACGGCGGT
ACGGAGCGCG TCGTGTCCTA CATCACCGAG GCGCTCGTCG ATCTCGGCCA TGATGTGACG
CTGTTCGCCA GCGGCGATTC GACGACCCGG GCGAAGCTCG AACCCGTGTG GCCGCGCGCG
CTGCGGCTCG ATTCGTCGAT CCGCGACCGG GTCGCCCCGC ACATGCTGCT GATGGAGACG
GTCGCGCGCC GCGCGAAGGA CTTCGACGTG CTCCATTTCC ACATGGACTA CTACTCGTTC
TCGGTCTTCA ACCGGCAGCA AACGCCGTAC GTGACGACGC TGCACGGCCG GCTCGACCTG
CCCGAGCAGC AGCCGGTGTT CGACACGTTC AACACGGCGC CCGTGATCTC GATTTCCAAT
TCGCAGCGCC AGCCGCTGCC GCAGGCGAAG TGGCTCACGA CCGTCTACCA CGGGCTGCCC
GAGACGATGT ACATGCCGCA GCCTGTCGAG CCGCGCTATC TCGCGTTCCT GGGCCGTATC
TCGCCGGAGA AGCGCGTCGA CACGGCGATC CGGATCGCCG GCCAGTGCGG GCTGCCGATC
CGGATCGCCG CGAAGATCGA TGCGGCCGAC GAGGAATACT TCGACCGCGA GATCAAGCCG
CTTTTCGCGT TGCCGCACGT CGAATTCATC GGCGAGATCG CCGATCATCA GAAGGCCGAA
TTCCTGTCGG GCGCGCATGC GCTGCTGTTT CCGATCGACT GGCCGGAACC GTTCGGGCTG
GTGATGATCG AGGCGATGTC GTGCGGCACG CCGGTAATCG CATTCAATCG CGGCGCGGTG
CCGGAAGTGA TCGACGAGGG CGTGTCGGGT TTCATCGTCG AGGATGAAAT CAGCGCGGTG
GCCGCCGTGA ACCGGCTGCA CCTGCTGCCG CGCGCGCGCG TGCGGCAGCG CTTCGAGCAG
CGCTTCACAT CGCGCCGGAT GGCGCAGCAG TACGTCGATG TCTACCAGTC ACTGATTCGC
GCACAGAAGC GCTCGCGCTT CAAGGTGATC GACTCGACGA CCTGA
|
|---|
| Protein sequence | MRIAQIAPLT ESVPPKLYGG TERVVSYITE ALVDLGHDVT LFASGDSTTR AKLEPVWPRA
LRLDSSIRDR VAPHMLLMET VARRAKDFDV LHFHMDYYSF SVFNRQQTPY VTTLHGRLDL
PEQQPVFDTF NTAPVISISN SQRQPLPQAK WLTTVYHGLP ETMYMPQPVE PRYLAFLGRI
SPEKRVDTAI RIAGQCGLPI RIAAKIDAAD EEYFDREIKP LFALPHVEFI GEIADHQKAE
FLSGAHALLF PIDWPEPFGL VMIEAMSCGT PVIAFNRGAV PEVIDEGVSG FIVEDEISAV
AAVNRLHLLP RARVRQRFEQ RFTSRRMAQQ YVDVYQSLIR AQKRSRFKVI DSTT
|
|---|
| |