| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1674 |
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| Symbol | |
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| ID | 4310995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 1849947 |
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| End bp | 1851107 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638149489 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_773565 |
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| Protein GI | 115351726 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.446059 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCC AGTCGGGTGC GCCGGTTGCG GGCGCGCCGT CCTTCGTTCC TTCGTCCGGC
GCGACTACGC GCGCCGAGAC CTTTGTCCAG ATCGTCGACG CCGTCAAGAA ATTCGGCGAG
ACCGAAGTGG TGCGCAACGT GAACCTGACG GTGCGCCAGG GCGAGCTGTT CGCGCTGCTC
GGCAGCTCGG GTTCCGGCAA GTCGACGCTG CTGCGCATGC TCGCGGGCCT CGAGACGGTC
ACCTCGGGCA AGATCCTGAT CGACGGCGAG GACCTCGCGC AGATGCCGCC GTACAAGCGG
CCCGTGAACA TGATGTTCCA GTCGTATGCG CTGTTCCCGC ACATGTCGGT CGAGGCGAAC
GTCGCCTACG GCCTGAAGCA GGAAGGCACG CCGAAGGCCG AGCTGAAGGA GCGCGTCGCC
GCGGCGCTCG AGCTCGTGCA GATGAGCAAG TACGCGAAGC GCAAGCCGCA CCAGCTGTCG
GGCGGCCAGC AGCAGCGCGT CGCGCTCGCG CGTTCGCTCG TCAAGCGCCC GAAGGTGCTG
CTGCTCGACG AGCCGATGTC GGCGCTCGAC AAGCAGATCC GCCAGCGCAC GCAGATCGAG
CTCGTCAATA TCCTGAAGAA GGTCGGCGTC ACCTGCATCA TGGTCACGCA CGACCAGGAA
GAGGCGATGA CGATGGCGAA CCGGCTCGCC GTGATGAGCG AAGGGCAGAT CGTGCAGATC
GGCTCGCCGA ACGAAGTCTA CGAATATCCG AACAGCCGCT TCTCGGCCGA GTTCATCGGC
TCGACGAACC TGTTCGACGG CGTCACGGTC GAGGACGAAC CCGACTACGT GTATATCGAA
TCCCCGGAGC TGCCGAGCCG GCTGTACGTG AGCCACGGGA TCACGGGCCC GCTCGGGATG
CCGGTCACGG TGTCGGTGCG CCCCGAGCGC ATCGCGCTCA CGCGCAAGCC GCCCGAAGGC
GCGTTCAACT GGGCGCGCGG CAGGATCACC AACGTCGCGT ACATGGGCGG CTATTCGCTG
TATCACGTGA AGCTCGACGC GGGCAAGACG GTGATCGCGA ACGTGTCGAG CCTCGCGATC
ACCGAGCTCG ACACGCCGTC GCTCGGCGAC GAGATCTACG TGCGCTGGAG CGCGACCGCC
GGCGTGGTGC TGACGTCATG A
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| Protein sequence | MNSQSGAPVA GAPSFVPSSG ATTRAETFVQ IVDAVKKFGE TEVVRNVNLT VRQGELFALL
GSSGSGKSTL LRMLAGLETV TSGKILIDGE DLAQMPPYKR PVNMMFQSYA LFPHMSVEAN
VAYGLKQEGT PKAELKERVA AALELVQMSK YAKRKPHQLS GGQQQRVALA RSLVKRPKVL
LLDEPMSALD KQIRQRTQIE LVNILKKVGV TCIMVTHDQE EAMTMANRLA VMSEGQIVQI
GSPNEVYEYP NSRFSAEFIG STNLFDGVTV EDEPDYVYIE SPELPSRLYV SHGITGPLGM
PVTVSVRPER IALTRKPPEG AFNWARGRIT NVAYMGGYSL YHVKLDAGKT VIANVSSLAI
TELDTPSLGD EIYVRWSATA GVVLTS
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