Gene Bamb_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_1568 
Symbol 
ID4310228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008390 
Strand
Start bp1735454 
End bp1736197 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID638149384 
ProductIclR family transcriptional regulator 
Protein accessionYP_773460 
Protein GI115351621 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTCA AACTCGTTGC CCGCACGCTC GACCTGTTCG AGCTGTTCGC CGCCGAACGG 
CGGCCGCTGC CGCTCACCGA GCTCGCGCGC CTGCTCAATG TGCCGGCGTC GAGCTGCCTG
GCGATGGCGC GCACGCTCGT GAGCCGCGGC TATCTGTACG AGGTGCGCAA GCGCGGCGGC
TACTACCCGA CGCGGCGGCT GCAGACGATC GCCGCGGCGA TCGACGCGAC CGATCCGGTC
GTCGACATCG TGCATCCGCA TCTCGTCGCG CTGCGCGATG CGAGCCGCGA GACGGCCGTG
CTCGGCAAGA TCCAGGGCAC GTCGGTCACG TATCTCGACG TCGTCGAATC CGAGCAGGCG
ATCCGCTATA CGCGCCAGCC GGGCGAGCTG CGCCCGCTGC ATGCGAACTC GATCGGCAAG
GCGATCTTCG CGGAACTCGC GAGCGAGGCG CAGCAGGCGC TCGGCGCGCA GCTGTCATTC
GAACGCTTCA CCGACGCGAG CGTCGCGGAC CTGCCGGCGC TCGTCGCGCA AACCGCGTGG
TTTCGCGAAC TGGGCTGGGC CGAGAACTTC GGCGAAAGCG CGCCCGAGCT GTCGGCGATC
GCGGTCGCGC TGACGCTCGA CGGCGACTGG TACGGGCTGT CGGTCGTCGG CCCGACCGAG
CGGATCCGCC AGCATCGCGA CACGCATGCG GCGCTGCTGG TCGACGCGAA GGCGCGGTTG
CTGGCCGAGC AGGGGCGCGG GTAG
 
Protein sequence
MDVKLVARTL DLFELFAAER RPLPLTELAR LLNVPASSCL AMARTLVSRG YLYEVRKRGG 
YYPTRRLQTI AAAIDATDPV VDIVHPHLVA LRDASRETAV LGKIQGTSVT YLDVVESEQA
IRYTRQPGEL RPLHANSIGK AIFAELASEA QQALGAQLSF ERFTDASVAD LPALVAQTAW
FRELGWAENF GESAPELSAI AVALTLDGDW YGLSVVGPTE RIRQHRDTHA ALLVDAKARL
LAEQGRG