Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1516 |
Symbol | |
ID | 4311776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | + |
Start bp | 1664612 |
End bp | 1665334 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638149332 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_773408 |
Protein GI | 115351569 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCGGCT TGGCTCCCAA ATATCTGTCC TGGCTCTGGC AGGGCTTCCT GCTCACGCTC GGCCTCGCGG CCGCGTCGGC GCTCGCCGCG ACCGTCGGCG GGCTGCTGCT CGCCGTCATG CGGCATGCAC GCGGCACAGC AGTGCGCACG GTGGCGGCCG GCTACGTCGT CGCATTCCGC AACACGCCGC TGCTCGTGCA ATTGCTGTTC TGGTACTTCG GCGTCGCGTC GTTGCTGCCC GATACGTGGA TCACGTGGCT GAACGCGCGT CATGAACTGA GCGCGGGCCC GCTCACGCTC GCGTGGCCGT CGTTCGAGTT CGTCGCCGGC TGGGTCGGCT TGAGCGCCTA CACGGCCGCG TTCGTCGCCG AGGAATGCGA AGCCGGGCTG CGCGGCGTGC GCGGTGCGCA ACACGACGCG GCCGCGGCGC TCGGCCTCAC GCCGATGCAG TCGCTGCGCT ACGTGGTGCT GCCGCAGGCC GTGCGCATCG CGCTGCCGTC GCTGTTCGGC CAATACATGA ATCTCGTGAA GAACTCGTCG CTCGCGATGG CGATCGGTGT CGCCGAGCTG TCGTATGCGT CGCGGCAGGT CGAGACGGAG ACGTTCAAGA CCTTTGCCGC GTTCGGTGTC GCGACCGTGC TGTACGTCGC CGCGGTGGCC GCGATCGAGG CCGGCGCCTA CGCGGCCACG CAATGGCGCG ACCGGCTCGC GGCGGGGCGT TGA
|
Protein sequence | MLGLAPKYLS WLWQGFLLTL GLAAASALAA TVGGLLLAVM RHARGTAVRT VAAGYVVAFR NTPLLVQLLF WYFGVASLLP DTWITWLNAR HELSAGPLTL AWPSFEFVAG WVGLSAYTAA FVAEECEAGL RGVRGAQHDA AAALGLTPMQ SLRYVVLPQA VRIALPSLFG QYMNLVKNSS LAMAIGVAEL SYASRQVETE TFKTFAAFGV ATVLYVAAVA AIEAGAYAAT QWRDRLAAGR
|
| |