Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_1278 |
Symbol | |
ID | 4311676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008390 |
Strand | - |
Start bp | 1398671 |
End bp | 1400272 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638149087 |
Product | phosphoesterase |
Protein accession | YP_773170 |
Protein GI | 115351331 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3511] Phospholipase C |
TIGRFAM ID | [TIGR03397] acid phosphatase, Burkholderia-type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGTAG AACGTATGAA AACCCACGCC TGGATTCGCT TTACGCCGCT CGCGATTGCC GCGGCCGTCG CCCTCACCGC CTGCGGCGGC GACGACGTAC AGCAGCAAGG TCTGTCGACG GTGAAGAACG TCGTCGTGAT CTACGCGGAA AACCGCAGCT TCGACAACCT GTACGGCAAC TTTCCGGGCG CTAACGGCCT GCAGAACGTG ACGGCTGCCA GCGCGCAGCA GAAGGACCGC AACGGCCAGC CGCTCGCGAC GCTGCCGAAG GTCTGGGGCG GCCTGACCGC GAAGGGCGTG ACGCCGGCCG TGACCGAGGC GATGACGGCC AACCTGCCGA ACGCGCCGTT CGCGATCGAT GATCCGAACG GCTTCAACAC GCCGATGAGC GTGACGACGC GCGACCTGTA TCACCGCTTC TACGAGAACC AGATGCAGAT CAACGGCGGC AAGAACGACA TGTTCGCCGC GTGGGCCGAT TCCGGCGGTC TCGTGATGGG CCACTACACG CCCGACGCGA CGAAGCTGCC GCTGTGGAAG ATCGCGCAGC AGTTCACGCT CGCCGACAAC TTCTTCATGG GCGCGTTCGG CGGCTCGTTC CTGAACCACC AGTACCTGAT CTGCGCGTGC GCGCCGTTCT ACGCGAACGC GGACAAGAGC CCGGCGGCCG GTTCGATCTC GGCCGTCGCC GCCGACGGCA AGTCGCTGCA GCTCGCGAGC AACTCGCCGG CGTCCGCGCT CGACGGGACG CCGAAGTTCG TGAACTCGGG CAACCTGACG CCGGACTTCT ACGCGATCAA CACGATGCAG CCGCCGTACC AGCCGAGCGG CAACAAGGCC GCGGCGGGCG GCGATGCGAA CCTCGCGGAT CCGTCGGCGC CGACCACGCT GCCGCCGCAG ACGCAACAGA ACATCGGCGA CCTGCTGAAC AACGCGGGCG TGTCGTGGGC GTGGTATGGC GGTGCGTGGA ACCAGGCGCT GCAGGCCGCG CAGAGCGGCA CCGCGAACGT GATCTACGGC CCGAACATGA CGGCGCCGAA CTTCCAGCCG CACCATCAGC CGTTCAACTA CTACGCGAAC CAGGCGCCGG GCAGCACGAA CCGCGCGCAG CACCTGCTCG ACGGCGGCAC GGACGGCAGC GAGTTCCTCA AGGCGATCGA CGCGGGCACG CTGCCGCAAG TCGCGTTCTA CAAGCCGCAG GGCAACCTGA ACGAACACCC GGGCTACACG GACGTCGCGA GCGGCGACCA GCACATCGCG AACGTGCTCG CGCACCTGCA GGCGAGCCCG CAGTGGAAGA ACATGGTCGT GGTCGTCACG TACGACGAAA ACGGCGGGTT CTGGGATCAC GTGGCGCCGC CGAAGGGCGA CCGCTGGGGC CCGGGCACGC GGATTCCGGC GCTGATCGTG TCGCCGTTCT CGAAGAAGGG TTTCGTCGAC CATACGCAGT ACGACACCGC GTCGATCCTG CGCTTCATCA CGCGCCGCTT CTCGCTGCCG CGCCTGGCAG GCCTGCAGCA ACGCGACGAC GCGCTGAAGG CGAACGGCGC GCAACCGATG GGCGACCTGA CGAACGCGCT CGCGCTGTCG CCGAACCTGT AA
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Protein sequence | MRVERMKTHA WIRFTPLAIA AAVALTACGG DDVQQQGLST VKNVVVIYAE NRSFDNLYGN FPGANGLQNV TAASAQQKDR NGQPLATLPK VWGGLTAKGV TPAVTEAMTA NLPNAPFAID DPNGFNTPMS VTTRDLYHRF YENQMQINGG KNDMFAAWAD SGGLVMGHYT PDATKLPLWK IAQQFTLADN FFMGAFGGSF LNHQYLICAC APFYANADKS PAAGSISAVA ADGKSLQLAS NSPASALDGT PKFVNSGNLT PDFYAINTMQ PPYQPSGNKA AAGGDANLAD PSAPTTLPPQ TQQNIGDLLN NAGVSWAWYG GAWNQALQAA QSGTANVIYG PNMTAPNFQP HHQPFNYYAN QAPGSTNRAQ HLLDGGTDGS EFLKAIDAGT LPQVAFYKPQ GNLNEHPGYT DVASGDQHIA NVLAHLQASP QWKNMVVVVT YDENGGFWDH VAPPKGDRWG PGTRIPALIV SPFSKKGFVD HTQYDTASIL RFITRRFSLP RLAGLQQRDD ALKANGAQPM GDLTNALALS PNL
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