| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1278 |
|---|
| Symbol | |
|---|
| ID | 4311676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1398671 |
|---|
| End bp | 1400272 |
|---|
| Gene Length | 1602 bp |
|---|
| Protein Length | 533 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638149087 |
|---|
| Product | phosphoesterase |
|---|
| Protein accession | YP_773170 |
|---|
| Protein GI | 115351331 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3511] Phospholipase C |
|---|
| TIGRFAM ID | [TIGR03397] acid phosphatase, Burkholderia-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTAG AACGTATGAA AACCCACGCC TGGATTCGCT TTACGCCGCT CGCGATTGCC
GCGGCCGTCG CCCTCACCGC CTGCGGCGGC GACGACGTAC AGCAGCAAGG TCTGTCGACG
GTGAAGAACG TCGTCGTGAT CTACGCGGAA AACCGCAGCT TCGACAACCT GTACGGCAAC
TTTCCGGGCG CTAACGGCCT GCAGAACGTG ACGGCTGCCA GCGCGCAGCA GAAGGACCGC
AACGGCCAGC CGCTCGCGAC GCTGCCGAAG GTCTGGGGCG GCCTGACCGC GAAGGGCGTG
ACGCCGGCCG TGACCGAGGC GATGACGGCC AACCTGCCGA ACGCGCCGTT CGCGATCGAT
GATCCGAACG GCTTCAACAC GCCGATGAGC GTGACGACGC GCGACCTGTA TCACCGCTTC
TACGAGAACC AGATGCAGAT CAACGGCGGC AAGAACGACA TGTTCGCCGC GTGGGCCGAT
TCCGGCGGTC TCGTGATGGG CCACTACACG CCCGACGCGA CGAAGCTGCC GCTGTGGAAG
ATCGCGCAGC AGTTCACGCT CGCCGACAAC TTCTTCATGG GCGCGTTCGG CGGCTCGTTC
CTGAACCACC AGTACCTGAT CTGCGCGTGC GCGCCGTTCT ACGCGAACGC GGACAAGAGC
CCGGCGGCCG GTTCGATCTC GGCCGTCGCC GCCGACGGCA AGTCGCTGCA GCTCGCGAGC
AACTCGCCGG CGTCCGCGCT CGACGGGACG CCGAAGTTCG TGAACTCGGG CAACCTGACG
CCGGACTTCT ACGCGATCAA CACGATGCAG CCGCCGTACC AGCCGAGCGG CAACAAGGCC
GCGGCGGGCG GCGATGCGAA CCTCGCGGAT CCGTCGGCGC CGACCACGCT GCCGCCGCAG
ACGCAACAGA ACATCGGCGA CCTGCTGAAC AACGCGGGCG TGTCGTGGGC GTGGTATGGC
GGTGCGTGGA ACCAGGCGCT GCAGGCCGCG CAGAGCGGCA CCGCGAACGT GATCTACGGC
CCGAACATGA CGGCGCCGAA CTTCCAGCCG CACCATCAGC CGTTCAACTA CTACGCGAAC
CAGGCGCCGG GCAGCACGAA CCGCGCGCAG CACCTGCTCG ACGGCGGCAC GGACGGCAGC
GAGTTCCTCA AGGCGATCGA CGCGGGCACG CTGCCGCAAG TCGCGTTCTA CAAGCCGCAG
GGCAACCTGA ACGAACACCC GGGCTACACG GACGTCGCGA GCGGCGACCA GCACATCGCG
AACGTGCTCG CGCACCTGCA GGCGAGCCCG CAGTGGAAGA ACATGGTCGT GGTCGTCACG
TACGACGAAA ACGGCGGGTT CTGGGATCAC GTGGCGCCGC CGAAGGGCGA CCGCTGGGGC
CCGGGCACGC GGATTCCGGC GCTGATCGTG TCGCCGTTCT CGAAGAAGGG TTTCGTCGAC
CATACGCAGT ACGACACCGC GTCGATCCTG CGCTTCATCA CGCGCCGCTT CTCGCTGCCG
CGCCTGGCAG GCCTGCAGCA ACGCGACGAC GCGCTGAAGG CGAACGGCGC GCAACCGATG
GGCGACCTGA CGAACGCGCT CGCGCTGTCG CCGAACCTGT AA
|
|---|
| Protein sequence | MRVERMKTHA WIRFTPLAIA AAVALTACGG DDVQQQGLST VKNVVVIYAE NRSFDNLYGN
FPGANGLQNV TAASAQQKDR NGQPLATLPK VWGGLTAKGV TPAVTEAMTA NLPNAPFAID
DPNGFNTPMS VTTRDLYHRF YENQMQINGG KNDMFAAWAD SGGLVMGHYT PDATKLPLWK
IAQQFTLADN FFMGAFGGSF LNHQYLICAC APFYANADKS PAAGSISAVA ADGKSLQLAS
NSPASALDGT PKFVNSGNLT PDFYAINTMQ PPYQPSGNKA AAGGDANLAD PSAPTTLPPQ
TQQNIGDLLN NAGVSWAWYG GAWNQALQAA QSGTANVIYG PNMTAPNFQP HHQPFNYYAN
QAPGSTNRAQ HLLDGGTDGS EFLKAIDAGT LPQVAFYKPQ GNLNEHPGYT DVASGDQHIA
NVLAHLQASP QWKNMVVVVT YDENGGFWDH VAPPKGDRWG PGTRIPALIV SPFSKKGFVD
HTQYDTASIL RFITRRFSLP RLAGLQQRDD ALKANGAQPM GDLTNALALS PNL
|
|---|
| |