| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_1203 |
|---|
| Symbol | |
|---|
| ID | 4309934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008390 |
|---|
| Strand | - |
|---|
| Start bp | 1317908 |
|---|
| End bp | 1318870 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638149011 |
|---|
| Product | aldose 1-epimerase |
|---|
| Protein accession | YP_773095 |
|---|
| Protein GI | 115351256 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2017] Galactose mutarotase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGCG CCATCGCGCA CCCCCGCCCA CCCCGTTCAT ACCGATTCGC CATGCCGATC
TTCCAGCAGC ACGACATTCA CGAACTTCAC GCCGGCCCGT CGCTCGTTCG GGTCGCCCCG
CAATTCGGCG GCCGCCTGCT GTCGTGGCAC GTCGACGGCG AGCCGATCAT CTTCTGGCCG
GAAACGGCCG ACTGGAGCAA CCTCGCGCGC GTGCGCGGCG GCAATCCGCT GCTGTTCCCG
TTCCTCGGCC GCCACCGCGT CGACGGCGAA CTGGGCCGCT GGCGCGATGC CGCCGGCGTG
GTCCGCGACC TGCCGATGCA CGGTTTCGCA CGTGACCTGC CGTTCGCGGC ACAACCGTCG
GCCGACGGCG CCGCACTCAC GATGACGCTG GAAGGCAACG AAGCACTGCA CGCGAGCTAC
CCGTTCGATT TCCGCTTCGA AACGACCTAC CGGCTCGCCG ACGCGCACAC GCTGGAGGTC
GCGCTCACCA CGACCAACCG CGGCGACACG CCGCTGCCCT ACTACGCGGG CCACCATTTC
TATTTCGCGC TGCCGCACGG CGAGCGCGCG CAAACCACGC TCGAGCTGCC GCCCACGCAC
CGCTGCGCGC AGAACGCCGA CGGCTCCATC AGCGCGCCCC AACGCGGGGA AGCGCGTTAC
ACGCTCGACG ATCCGGACAT CCTCGACCGC TTCCACTGCC TCGACGGCGC GCCGTCCACG
CCGGTGCGCA TCGTGATGCC GGGCCGCCGC CGCACGATCG AGATCGCGCT CGACGTACCG
GGCTCGATCC CGTGGTACGC AGTCACGACC TGGACCGAAA AGCCGGAATC GGACTTCTAC
TGCGTCGAGC CATGGCTCGG GCTGCCGGAC GCGATCCACA ACGGTCTCGG GCTACGCATG
CTTGCGCCGG GTGCGACCGA AACGGCCACG CTGCGCATCC GCGTGGTGCC GCTCGCGGGC
TGA
|
|---|
| Protein sequence | MERAIAHPRP PRSYRFAMPI FQQHDIHELH AGPSLVRVAP QFGGRLLSWH VDGEPIIFWP
ETADWSNLAR VRGGNPLLFP FLGRHRVDGE LGRWRDAAGV VRDLPMHGFA RDLPFAAQPS
ADGAALTMTL EGNEALHASY PFDFRFETTY RLADAHTLEV ALTTTNRGDT PLPYYAGHHF
YFALPHGERA QTTLELPPTH RCAQNADGSI SAPQRGEARY TLDDPDILDR FHCLDGAPST
PVRIVMPGRR RTIEIALDVP GSIPWYAVTT WTEKPESDFY CVEPWLGLPD AIHNGLGLRM
LAPGATETAT LRIRVVPLAG
|
|---|
| |